Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2388 ATGAACTGGAACTGGAACTGGAAGCAGGGATGTGATGAGGCAGGGATGGCTGGCTACAACAACAAAGAAGAGGGAGGAGGAAGAAGCAGTCAGCAGGAGGATCAATTACAATTAGGTCGGTTTGTGCCGCACCTCTTCAACCTGCACCTCCAAACCCCTAACACCAACAACACTCATCAACATGCCCACAACCCAACACAACAAGACACCGACACCGCTGCTGATGGTGGAGGTGGAGGTGGCGGAGGTGATGGTGATGGTGATGGTGGAGGCGGATCCACAGCCGAACCCTCCACCGTGCGCCGCCCACGTGGCCGTCCAGCTGGATCCAAGAACAAGCCGAAGCCTCCCATCATAGTCACGCGGGATAGCCCCAATGCATTGCGCTCGCACGTGCTTGAGGTCTCCGCCGGGGCGGAGCTGGTGGAGACACTCTCCACCTACGCGAGGCGGAGAGGGAGGGGCGTCTCCGTCCTCAGCGGATCCGGCACGGTGGCTAACGTCACGCTTCGCCAGCCCGGAGGCACCGTCGTGACCCTCCACGGTCGGTTCGAGATCCTTTCCATTTCGGGGACGGTGCTCCCGCCGCCAGCGCCGCCGGGATCGGGGGGGCTGTCGGTGTACCTGTCGGGCGGCCAGGGTCAGGTGGTTGGGGGCAGCGTGGTGGCCCCTCTGGTGGCGTCGGGTACGGTGGTTTTGATGGCTGCTTCCTTTGCCAATGCCATGTTTGAGAGGCTTCCCTTGGCCTTGGATGACGATGATCCTCACGATGACCACATCCAACAACCTGCGACATCGCAGTCTTCTGGCGTCACAGGAACTGGACAGCTCGGAGAAGGTGCTGGCGGCGGAGGCGGAGGCCGAGGCGGTGTTCCTTTCTTCAATACGGCGGCAGGTGGTGGAGGAGGAAGGAACGTGAACAGGAGCAGCTATCCGTTTTCGGTTCCCGGCGGCGATCTATTTGGATGGGGTGGTGGAGGTGGTGGAGGTGCAGGTGCAGGTGCAAATGCAGCACTGGAAATCAAACCCCCTCCTCCGTTCTAG 1044 0.6111 MNWNWNWKQGCDEAGMAGYNNKEEGGGRSSQQEDQLQLGRFVPHLFNLHLQTPNTNNTHQHAHNPTQQDTDTAADGGGGGGGGDGDGDGGGGSTAEPSTVRRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEVSAGAELVETLSTYARRRGRGVSVLSGSGTVANVTLRQPGGTVVTLHGRFEILSISGTVLPPPAPPGSGGLSVYLSGGQGQVVGGSVVAPLVASGTVVLMAASFANAMFERLPLALDDDDPHDDHIQQPATSQSSGVTGTGQLGEGAGGGGGGRGGVPFFNTAAGGGGGRNVNRSSYPFSVPGGDLFGWGGGGGGGAGAGANAALEIKPPPPF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2388 347 MobiDBLite consensus disorder prediction 250 295 - -
Dod09g2388 347 CDD DUF296 129 194 IPR005175 -
Dod09g2388 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 319 IPR014476 GO:0003680
Dod09g2388 347 ProSiteProfiles PPC domain profile profile. 125 264 IPR005175 -
Dod09g2388 347 MobiDBLite consensus disorder prediction 50 125 - -
Dod09g2388 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 39 319 - -
Dod09g2388 347 MobiDBLite consensus disorder prediction 50 73 - -
Dod09g2388 347 MobiDBLite consensus disorder prediction 326 347 - -
Dod09g2388 347 Gene3D - 128 251 - -
Dod09g2388 347 MobiDBLite consensus disorder prediction 261 275 - -
Dod09g2388 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 239 IPR005175 -
Dod09g2388 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2388 Dod-Chr9 45058391 45060295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2388 84 248 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 71.591 2.51e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2388 - - aip:107609871 318.161