Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2386 ATGGCGTACCAAGCGATTCAGGGGCCAAGCTCGGGATCGAGTTCGAGTTCGGGGTTTCAATTGTTGAACTCCCCTTTTGGCGACACCACATACACCAAGGTCTTCGTTGGAGGATTGGCCTGGGAGACTCAGAGCGAAACCATGCGCCGTTACTTCGAGCAGTTCGGGGACATTCTCGAGGCCGTCGTCATCACCGATAAGAACACCGGCCGATCCAAAGGCTATGGTTTTGTGACTTTCCGGGATCCCGAGGCTGCTAGGAGAGCCTGTGCTGATCCGACTCCGATCATTGATGGCAGAAGGGCCAATTGTAACCTGGCTTCACTTGGCCGACCACGCCCTCCCCTCCCTTATGGACGGATAAGACCAGCCTCCCCTTATGTTGGAGGTATGCAACCTGCGCCACGAGGTGCTTTTGTTGGAGGCTTTGGCTATCAGCAACCACTTTCCTATGGCTATCAGCAAGGGTTGGTTTATCCTCCGTATGGGTATACGACATATGGACCTGAATACATCTACCCACAGGGTCTGTACAATCCATATGTGGGCCAACAGTACCTTCAGATATATGGAGTGCCTGGGGCAGTGAACACAACTGTTTATCCTTATGGACAATTGGGTCAAGCTATTCCTAGTGGCCATGGTTATACAGCAATGCAAGGCTATACAGTACCAGGCCATCAGATTGTGCCCTATGGTGGATCGAATGTTAATGCCATGACGACTTCACCTATGCCTGCCATCCAAACACCATATCCTAGTGGAATTGCTGCACCTGTTCCAGGCCAGCCGCAATTTATTGTTCCTACTCCTTCTCCACAGTTTATGCAAGGTAGCGGTCCTGACCAAACAGCCGGGTGA 861 0.518 MAYQAIQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYGRIRPASPYVGGMQPAPRGAFVGGFGYQQPLSYGYQQGLVYPPYGYTTYGPEYIYPQGLYNPYVGQQYLQIYGVPGAVNTTVYPYGQLGQAIPSGHGYTAMQGYTVPGHQIVPYGGSNVNAMTTSPMPAIQTPYPSGIAAPVPGQPQFIVPTPSPQFMQGSGPDQTAG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2386 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 90 IPR000504 GO:0003723
Dod09g2386 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
Dod09g2386 286 PANTHER BOULE-RELATED 1 282 IPR037366 GO:0003729
Dod09g2386 286 Gene3D - 4 116 IPR012677 -
Dod09g2386 286 CDD RRM_RBM24_RBM38_like 32 107 - -
Dod09g2386 286 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 1 282 - -
Dod09g2386 286 SMART rrm1_1 33 105 IPR000504 GO:0003723
Dod09g2386 286 SUPERFAMILY RNA-binding domain, RBD 31 145 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2386 Dod-Chr9 45022832 45028353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2386 21 108 C2H2 Transcription Factor Family AT2G19380 42.045 1.15e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2386 - - aprc:113864528 528.094