Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2383 ATGTCAGGATCCGACATGAGGAACAGAGAACCCTTCACCGTTGATCTCCACAACATGAACATGAATATGAACATGCGTTTGGACTATGCTGCTGATGGCACCCCTCTCTACAACAACCCGCTTCAACCTAATGCTCCCCCGACCTTCCACCCCTCAACTGCCGTCACAGCCGCGCCGATCAACATCAACGGCGTCGGAGCTGGTGTCGAATCGGCCGCGGTGACCCAGGCCCACGTGGGGAGCAGCTCCGAGCCCAAGAAGAAGAGAGGCAGGCCCCGGAAATACGGGCCCGATGGGAGCTTGGCGCCTACCCCTCCTGCTGTGGGCCTTAACAATATCCAGAACCAGAACCTGAACCAGCCCGATGGAGGAGAAGGAGAGGTTTCGCCGGGAATCGCTTCGGCATCGCCCAATGCCGTGAAGAAAAGGGGAAGACCTCGCGGCTCTCTCAACAAGCATCGTCACTCGAGAGGGTCAGGGAAATCTCCATATGCAACCCATGTCCTCACTGTCAAAGCTGGAGAGGACTTGTCAGCAAAGATTGTGTCACTCTCCACAAATGGTCCAAGAAATGTTTGCATCTTAACAGCAAATGGAACCATATCTAATGTGACACTTAGCCAGCCTGCAGTATCTGGAGGAACTGTGACTTATGAGGGTCGGTTTGAGATCCTGGCACTTCGCGGTTCTTTGATTCTTTCTGGAGATGGTGAATATCAGAGAGCTGGTGGCTTAAGTGTGACCTTGGCAGGGCCAGATGGCCGGGTTCTGGGTGGTGGGGTTGCAGGTGTTTGCATAGCTGCTTCTCCTATTCAGATAGTTTTGTTGAGCTTTGTTGCACCAGGTCGCAAGGGATCCGGTTCGGCAAACCAGATGGAAAACTTATCTACCCCGCCTGCTGTTCCCACAGCAGGCCAAAGCAGTTCCCCATCACGAGGTACTTTTAGTGAATCTTCCGGTGGATCTGGGAGCCCACTTAACCTGAGTACAGAAGCCTGCAATAACAATAACACCCCACAAGGCATTTCAGGCATGCCTTGGAAGTGA 1047 0.5339 MSGSDMRNREPFTVDLHNMNMNMNMRLDYAADGTPLYNNPLQPNAPPTFHPSTAVTAAPININGVGAGVESAAVTQAHVGSSSEPKKKRGRPRKYGPDGSLAPTPPAVGLNNIQNQNLNQPDGGEGEVSPGIASASPNAVKKRGRPRGSLNKHRHSRGSGKSPYATHVLTVKAGEDLSAKIVSLSTNGPRNVCILTANGTISNVTLSQPAVSGGTVTYEGRFEILALRGSLILSGDGEYQRAGGLSVTLAGPDGRVLGGGVAGVCIAASPIQIVLLSFVAPGRKGSGSANQMENLSTPPAVPTAGQSSSPSRGTFSESSGGSGSPLNLSTEACNNNNTPQGISGMPWK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2383 348 CDD DUF296 166 278 IPR005175 -
Dod09g2383 348 Gene3D - 165 290 - -
Dod09g2383 348 MobiDBLite consensus disorder prediction 145 160 - -
Dod09g2383 348 MobiDBLite consensus disorder prediction 287 348 - -
Dod09g2383 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 166 279 IPR005175 -
Dod09g2383 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 163 280 - -
Dod09g2383 348 MobiDBLite consensus disorder prediction 107 123 - -
Dod09g2383 348 MobiDBLite consensus disorder prediction 286 348 - -
Dod09g2383 348 ProSiteProfiles PPC domain profile profile. 161 299 IPR005175 -
Dod09g2383 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 22 347 IPR039605 GO:0003680
Dod09g2383 348 PANTHER OS08G0512400 PROTEIN 22 347 - -
Dod09g2383 348 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Dod09g2383 348 SMART AT_hook_2 140 152 IPR017956 GO:0003677
Dod09g2383 348 MobiDBLite consensus disorder prediction 76 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2383 Dod-Chr9 45004591 45009403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2383 32 348 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 47.164 3.73e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2383 - - ahf:112705741 375.17