Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2381 ATGGAAGAACTGCTGTGTGAACTTTCCGACCATGAAAAGAGAAACGCGCAAGGTTTGCCACCTGGTTTTAGGTTTCACCCCACTGACGAAGAACTCATAACCTTCTATTTGGCTTCAAAAGTGTTTAATGGGAGCTTCACTGATGTCAAGTTTGCCGAGGTTGACCTCAATAGATGTGAGCCGTGGGAACTTCCAGAAGTTGCAAAGATGGGGGAGAGAGAGTGGTACCTGTTCAGCCTGAGGGACAGGAAATATCCAACAGGGCTAAGAACAAACAGGGCAACGGGGGCTGGGTACTGGAAGGCCACTGGGAAGGACAAGGAAGTATACAGTGGGTCGAGCGGGGCCTTACTTGGCATGAAGAAGACCCTTGTTTTCTACAAAGGCAGGGCCCCTCGTGGTGAGAAGACCAAATGGGTCATGCACGAGTACCGTTTGGATGGTCACTTTCCCCTTTCTCGCCCTCACTCTCACGCCTGCACCAAGGAGGAATGGGTGATATGCAGAGTATTTCATAAATCTGGGGAAAAGAGGAGTCCTCCACTTCTCCAAGTCCAAGGACACATGGATCCTTCCTCACCCACCACAAAAGGTTCTTTACCACCATTACTACTAGCAAGCCCAACTTCCTTTACACTGGAACTGGATTGCCAATCCCAAAGCTCATCCCAGCGAGACTTCCAAAGCCAAGTTATGATTCACCAACAAAAGCAAAACGACATCTCCCACTCCCACTCCCATCTTTTACCCTTTTTGCATGCATTCCAACCTCCTTTTCCTAGCCATCCATCTTCAGATCAACTATTCTTCAAGTCCCAGCAGCAGCTCCCACAACAAAATTGCACGGCCCTACTCAACCTCAAGGTCAAGGACGAGACTATTCCTAAAGTAAGCAAAACGGAGGCTACATTCTTCCCATACCAACAACTGCTAGATGATCCTAACTTGCAGCATTGGGTGGACAAGTTGAATCCAAATCCAGGTAACTCCTACATCTCCAATAACATGCCACTTGAGATGGATGCTGGCCTGATCGCGTTCTCATCAGGAGCTGCAAATGCTGAAGTTAGGGATATGTCGTCTTCAGCTTCAATGACATTCAACAGAGCAGCGGTTCTAATTTCTACCTCGTAG 1134 0.4815 MEELLCELSDHEKRNAQGLPPGFRFHPTDEELITFYLASKVFNGSFTDVKFAEVDLNRCEPWELPEVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVYSGSSGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGHFPLSRPHSHACTKEEWVICRVFHKSGEKRSPPLLQVQGHMDPSSPTTKGSLPPLLLASPTSFTLELDCQSQSSSQRDFQSQVMIHQQKQNDISHSHSHLLPFLHAFQPPFPSHPSSDQLFFKSQQQLPQQNCTALLNLKVKDETIPKVSKTEATFFPYQQLLDDPNLQHWVDKLNPNPGNSYISNNMPLEMDAGLIAFSSGAANAEVRDMSSSASMTFNRAAVLISTS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2381 377 Gene3D NAC domain 28 177 IPR036093 GO:0003677|GO:0006355
Dod09g2381 377 MobiDBLite consensus disorder prediction 186 201 - -
Dod09g2381 377 ProSiteProfiles NAC domain profile. 19 173 IPR003441 GO:0003677|GO:0006355
Dod09g2381 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 365 - -
Dod09g2381 377 MobiDBLite consensus disorder prediction 179 201 - -
Dod09g2381 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3-LIKE 8 365 - -
Dod09g2381 377 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Dod09g2381 377 SUPERFAMILY NAC domain 14 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2381 Dod-Chr9 44994427 44998136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2381 1 186 NAC Transcription Factor Family AT1G76420 71.505 2.29e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g2381 NAM 7.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2381 - - gmx:100780313 458.373