Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2368 ATGAATTTGCTCTTCATTCTTTGTCTGGTGGTGTTGCTCCCCTTTTTGGGAGCTTCTGTATCTTCTTATGTGGAGGCTGCAAATGCCTCATCCTCAAGACCCGCCGTTGTGGAGATTGGAGCTATCTTCACCTTCGATTCCACAATTGGGAGAGTGGCTAAAATTGCCATGGAGGAAGCAGTGAAGGATGTAAACGCCAACACTAGCATCCTTCATGGAACCAAACTTGTTCTTCACATGCAAGATTCCAATTGCAGTGGTTTTTGGGGCATGATTCAAGCTTTGCGGTTCATGGAGACCGATGTAGTTGCTATAGTAGGTCCACAATCTTCTGTGGCATTCCCTCGGGACTCCCCTTTGGCTATAGATTTGTCAACTGCCATTCTACAACTTTCTGAAACTGGTGATCTGCAGCGGATTCATGATAAGTGGATGCCACGAAGCATCTGTAGTTTGGATAATACTGAAATTGATTCAGATAGGCTTCAATTCAAAAGCTTCTGGGGGCTCTTTGTCATCTGCGGGATTGCTTGCTTTATAGCTCTTGTCATATATTTTCTGCAGATTATGATACAGCTAAGGCATGCTCCTCCTTCTGAACCTGCTTCTAATGCTAACTCAATTTCTGGTCGATTTCAAAGATTTCTTTCACTGATTGACGAGAAGGAAGACTCATCAAGGAGTGAGAGAAGAAAGAGGAGTAGAGAAGATCAACTGGGGAGGCACCCAAAGAGGATACAAACAGATGTAACAGCCAACTCACACTGA 768 0.4414 MNLLFILCLVVLLPFLGASVSSYVEAANASSSRPAVVEIGAIFTFDSTIGRVAKIAMEEAVKDVNANTSILHGTKLVLHMQDSNCSGFWGMIQALRFMETDVVAIVGPQSSVAFPRDSPLAIDLSTAILQLSETGDLQRIHDKWMPRSICSLDNTEIDSDRLQFKSFWGLFVICGIACFIALVIYFLQIMIQLRHAPPSEPASNANSISGRFQRFLSLIDEKEDSSRSERRKRSREDQLGRHPKRIQTDVTANSH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2368 255 SUPERFAMILY Periplasmic binding protein-like I 31 131 IPR028082 -
Dod09g2368 255 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 23 112 - -
Dod09g2368 255 PANTHER GLUTAMATE RECEPTOR 3.3 23 112 - -
Dod09g2368 255 PANTHER GLUTAMATE RECEPTOR 3.3 113 250 - -
Dod09g2368 255 Pfam Receptor family ligand binding region 55 113 IPR001828 -
Dod09g2368 255 Gene3D - 32 141 - -
Dod09g2368 255 MobiDBLite consensus disorder prediction 219 255 - -
Dod09g2368 255 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 113 250 - -
Dod09g2368 255 MobiDBLite consensus disorder prediction 219 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2368 Dod-Chr9 44908173 44912204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2368 113 233 Ion Channels AT1G42540 55.039 5.84e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2368 K05387 - gmx:100777478 214.157