Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2367 ATGATTTTTGGAGTGCATATGCATGTGGGTGCGGACTTTTCTCCTCCATTTACCATGTTAGAAGGTGAACACGACCAAGGCAATGATTTAGTGTTGGAAGATGAGAAATCGGTAGATTTGGATTGTCCAAAACGAATGACCAGAGGTAAGCCTCCACGCCACGTTTCCACTATGAGGCATAGCATCAGCACCACCGGATTGCTTGCTGCTCCAGATTCGAGTTTGGATGTGGAGGTTGCTGGGGGCAACTCATCTTCTGAAGACAACACAGATTTTCTACCCATATTTCGTTCAGGAAGTTGTGCTGAAAGAGGTCCTAAACAATATATGGAAGATGAACATATATGCATAGATGATCTTATTCAACATTTAGGTTCAGCGTCAAATGTTCACTTTACCGGAGCTTTTTATGGGGTGTTTGATGGTCATGGAGGTACAGATGCAGCATCATTTGTGAGAACTAACATCCTTAGATTCATAATTGAGGACTCCCATTTTCCAACCTGCGTGGGGAAGGCAATTAGATGTGCTTTTCTGAAAGCTGATTATGCATTTGCAGATTCTAGTTCGCTTGATATCTCTTCTGGAACGACTGCTTTAACAGCTCTCATACGTGGAAGGACCATGATAGTTGCCAATGCTGGGGATTGTCGGGCTGTACTAGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATCGCACTTCAGAAAGGCTAAGGATTGAGAAACTTGGTGGAGTGGTATACGATGGTTACTTGAATGGGCAGCTATCTGTTTCCCGTGCCTTAGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGCCCTTTGAGTGCAGAACCAGAGTTGCAGGAAATCAACCTCACTGAGGAAGATGAGTTCTTGATTATGGGCTGTGATGGCCTGTGGGATGTAATGAGCAACCAATGTGCTGTGACAATGGCAAGGAAAGAATTGATGATACATAATGATCCTGAAAGGTGTTCAAGAGAGCTGGTCAGGGAGGCTCTTAAGCGTAACTCGTGTGATAATTTAACAGTCATCGTGGTATGTTTCTCCCCAGATCCTCCTCCTAGGATAGAGACACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTCAAGGGTGTATTGGACTGTTAG 1173 0.4501 MIFGVHMHVGADFSPPFTMLEGEHDQGNDLVLEDEKSVDLDCPKRMTRGKPPRHVSTMRHSISTTGLLAAPDSSLDVEVAGGNSSSEDNTDFLPIFRSGSCAERGPKQYMEDEHICIDDLIQHLGSASNVHFTGAFYGVFDGHGGTDAASFVRTNILRFIIEDSHFPTCVGKAIRCAFLKADYAFADSSSLDISSGTTALTALIRGRTMIVANAGDCRAVLGRRGRAIEMSKDQKPNRTSERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEINLTEEDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPERCSRELVREALKRNSCDNLTVIVVCFSPDPPPRIETPPSRVRRSISAEGLNLLKGVLDC* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2367 390 ProSitePatterns PPM-type phosphatase domain signature. 136 144 IPR000222 GO:0043169
Dod09g2367 390 Gene3D - 79 360 IPR036457 -
Dod09g2367 390 SMART PP2C_4 87 355 IPR001932 -
Dod09g2367 390 Pfam Protein phosphatase 2C 98 349 IPR001932 -
Dod09g2367 390 ProSiteProfiles PPM-type phosphatase domain profile. 97 357 IPR001932 -
Dod09g2367 390 CDD PP2Cc 96 357 IPR001932 -
Dod09g2367 390 PANTHER PROTEIN PHOSPHATASE 2C 7 379 IPR015655 GO:0004722|GO:0006470
Dod09g2367 390 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 7 379 - -
Dod09g2367 390 SUPERFAMILY PP2C-like 92 358 IPR036457 -
Dod09g2367 390 SMART PP2C_SIG_2 112 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2367 Dod-Chr9 44897689 44901387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2367 12 389 PP2C-type Phosphatase Gene Family AT2G33700 72.368 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2367 K14803 - gmx:100778015 648.662