Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2361 ATGGAGGCAGAGCCGGAGACCCAGAATGGAATTGGAGGCTTATACATGAAGGTGATGACTGATGAACAAATGGAGATGCTGAGGCAACAGATATCTGTCTACGCCACCCTATGTGACCGCCTTGTTGAGATGCACAAGGCCATCACTACCCAACAGGACCTCGCAGGACTGAGGCTGGGTAATTTATACTGTGATCCGCTGATGGCATGCTCTGGACACAAGATAACTTCAAGGCAGCGTTGGACTCCAACGCCTCTGCAGCTTCAAATACTGGAGCGTATATTTGATGAAGGCAATGGCACTCCAAGCAAACAAAAGATCAAGGAGATAACCATGGAGCTAGGGCAACATGGCCAAATATCAGAGACAAATGTCTATAATTGGTTCCAGAATAGAAGGGCTCGCTCGAAACGGAAGCAACTTGCTCCCACACAAAGCAGTGCAGAACCAGAAGCGGACGCAGAAGTTGAGTCTCCAAAAGAGAAAAAGACCCGTGAAGAAAGCGTTCAATTTCAACCCTATGAGATTGAGAACTCATCACCACCTATGGCCAAGGATCTATTCATCCATAGTCCTGACATAGGATTTGAGCAGCTGATGAGTAAAATAGAAGCTGCAGGTGGCTACAATTCTTATTTTCTTTAG 645 0.4651 MEAEPETQNGIGGLYMKVMTDEQMEMLRQQISVYATLCDRLVEMHKAITTQQDLAGLRLGNLYCDPLMACSGHKITSRQRWTPTPLQLQILERIFDEGNGTPSKQKIKEITMELGQHGQISETNVYNWFQNRRARSKRKQLAPTQSSAEPEADAEVESPKEKKTREESVQFQPYEIENSSPPMAKDLFIHSPDIGFEQLMSKIEAAGGYNSYFL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2361 214 SUPERFAMILY Homeodomain-like 77 140 IPR009057 -
Dod09g2361 214 CDD homeodomain 78 140 IPR001356 GO:0003677
Dod09g2361 214 Pfam Homeodomain 78 138 IPR001356 GO:0003677
Dod09g2361 214 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 214 IPR044559 GO:0003700
Dod09g2361 214 MobiDBLite consensus disorder prediction 153 170 - -
Dod09g2361 214 SMART HOX_1 76 143 IPR001356 GO:0003677
Dod09g2361 214 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 214 - -
Dod09g2361 214 MobiDBLite consensus disorder prediction 137 185 - -
Dod09g2361 214 Gene3D - 79 144 - -
Dod09g2361 214 ProSiteProfiles 'Homeobox' domain profile. 74 139 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2361 Dod-Chr9 44863309 44865511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2361 14 212 Wox Gene Family AT4G35550 53.540 3.95e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod09g2361 Homeodomain 7.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2361 - - pvu:PHAVU_009G012200g 351.288