Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2355 ATGAGCTGCGTTTCCTGCTTTGTTTCTCGTCGCAAAGATGCCAGCAGAGTCCAAATTGACAATGGCTCTCGATCTGCCTCTTCAGGGACTGGGAGAGTGAAAGCAGCTGCTGCCGCGGCTGAGGGTAAAAGGAAGAGGAAGGAACTGTCGTCGTCAGGGTCAGGGTCGGAGGGGAAGGGGAAGAGTGTGAGCAGTCGGAAAAGCAATACGGCAGCAGCAAGTTTCGGTTTTAGAGAGCTTGCAGAGGCAACAAGGTGTTTCAACGAAGTGAACTTGATTGGTGAAGGTGGTTTTGGACGCGTTTACAAGGGTCGTCTCTCAACTGGCCAGGTTGTTGCCATTAAGCAATTGAGCCATGATGGTCATCAGGGCTTTCAGGAATTTGTGGTGGAGGTTCTTATGTTGAGCCTGCTTCACCATTCTAACCTCGTAAAGTTGATAGGCTACTGCACTGATGGGGATCAGAGGCTTTTGGTTTATGAGTACATGCCTATGGGTTCCCTTGAAGATCATCTTTTTGATCCTACCCAAGGCAAAGAACCACTAAGCTGGAGTAATCGGATGAAGATTGCTGTTGGGGCTGCTCGGGGCCTCGAGTATCTCCATTGTAAAGCAGATCCACCTGTTATCTATCGAGACTTGAAATCCGCAAACATCTTGTTAGACAATGAATTTAACCCAAAACTGTCGGATTTCGGGCTCGCTAAACTTGGACCTGTTGGGGACAATACCCATGTTTCAACTAGAGTGATGGGAACATATGGCTACTGCGCACCAGAGTATGCCATGAGTGGCAAATTAACACTTAAATCTGATATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGGGCAATAGATGCTAGTAGAAGACCAGGGGAGCAAAACTTAATTTCATGGTCTCGCCCATTTCTCAGTGATCGGAGAAGGTTTATACAATTGGTCGACCCTCTTTTGCAAGGAAGCTTCCCCTTGCGCTGTTTACATCATGCAATTGCCATTACTGCAATGTGTCTCCAGGAGCAACCAAAAGTTCGTCCACTCATTGGTGATATTGTTGTTGCACTGGAGTACCTAGCCTCTCAGAGTACCCCTGAAGTGCATAGGCATGGTATGCACAACCCATAA 1140 0.4746 MSCVSCFVSRRKDASRVQIDNGSRSASSGTGRVKAAAAAAEGKRKRKELSSSGSGSEGKGKSVSSRKSNTAAASFGFRELAEATRCFNEVNLIGEGGFGRVYKGRLSTGQVVAIKQLSHDGHQGFQEFVVEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPTQGKEPLSWSNRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDASRRPGEQNLISWSRPFLSDRRRFIQLVDPLLQGSFPLRCLHHAIAITAMCLQEQPKVRPLIGDIVVALEYLASQSTPEVHRHGMHNP* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2355 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Dod09g2355 379 SMART serkin_6 87 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2355 379 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Dod09g2355 379 Pfam Protein kinase domain 88 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2355 379 ProSiteProfiles Protein kinase domain profile. 87 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2355 379 MobiDBLite consensus disorder prediction 11 65 - -
Dod09g2355 379 SUPERFAMILY Protein kinase-like (PK-like) 68 361 IPR011009 -
Dod09g2355 379 PANTHER OS07G0668900 PROTEIN 1 368 - -
Dod09g2355 379 Gene3D Transferase(Phosphotransferase) domain 1 163 376 - -
Dod09g2355 379 CDD STKc_IRAK 93 361 - -
Dod09g2355 379 Gene3D Phosphorylase Kinase; domain 1 59 162 - -
Dod09g2355 379 PANTHER OS07G0668900 PROTEIN 1 368 - -
Dod09g2355 379 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2355 Dod-Chr9 44788372 44792421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2355 1 365 Glycoside Hydrolase AT3G07070 58.743 1.26e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod09g2355 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2355 - - gmx:100796595 578.941