Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2335 ATGGGTTGTTGCCAATCTTCGAATCGCCGAAACAACAAGAAGAGCAAGAATAACAACAACAACAACAACAGCAACAGCAAGAACAACCCTCATTCTCAACACGCCGTTGCTGCTTCCACCTCTAACGGCGCAGATAACGCCGTCACTGGCGCCGCCCTAGACGTGCCTCCGTTCTCGGAGTTCTCCCTCTCCGACCTCAAATCCGCCACCAACGGCTTCAGCTCTGATCACATCGTGTCGGAGAGCGGCGACAAAGCACCCAATGTCGTCTTCAAGGGCCGCCTTCACAACCACAACCGCCGTCTGATTGCCGTTAAGAGATTCTCCAAATTGGCCTGGCCCGACCCCAAGCAATTCGCCGATGAGGCATGGAGTGTTGGGAAATTGAGGCACCCGAGGCTTGCCAATTTGATTGGGTATTGCTGTGATGGGGATGAGAGGCTCCTCGTTGCAGAGTACATGCCTAACGACACTCTCGCCAAACATCTTTTTCACTGGGAAAATCAGACAATTGAGTGGAGCATGCGGTTAAGAGTTGCCCTATCCATCACCGAAGCATTAGATTATTGCAGTAACAAAGGTCATCCCTTGTACCATGACCTTAATGCCTACAGAGTTCTATTTGATGAGAATGGTGATCCTCGGCTTTCATGTTTTGGGTTGATTAAGAACAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTACATGAGAAATGGGAGGGTGACTCCAGAAAGTGTTATCTTCAGTTTTGGGACTGTGTTATTGGATCTTCTAAGCGGCAAGCATATTCCTCCAAGTCATGCTCTTGAAATGATAAGGGGTAAAAATATTCTACTCCTCATGGATTCACATTTGGAGGGAAACTTTTCCAACGATGAGGCAACTGTGGTTTTTGATCTTGCCTCTCAATGTTTGCAGTATGAACCTCGGGAGAGACCCAAGATTAAGGACCTTGTTACAACACTGTCTAAACTACAGAATAAACCTGATGTTCCATCATATGTCATGCTTGGCATTCCAAAGCATGAGGAAGCACCTCCAACCCCACAGCATCCTTTGTCTCCAATGGGTGATGCTTGTTCTCGTATGGACCTTACAGCGATTCATCAGATTTTGTTGATGACACACTACAAAGATGATGAAGGGACTAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGAGACCTGGCATTTCGTGACAAGGATTTCAAAACTTCAATTGAGTGTTATTCCCAGTTCATTGATGTCGGAACCATGGTTTCCCCAACCGTCTACGCACGGAGAAGTCTTTGCTACCTCTTTTGCGATCAACCAGATGCTGCTCTCCGAGATGCAATGCAGGCTCAGTTGGTCTACCCTGACTGGTCCACAGCATTTTACATGCAGGCGGTTGCTCTTTCCAAATTAAACATGGATAAGGATGCAGCTGACATGTTGAACGAGGCTGCTGCTCTAGAAGAGAAAAGGCAAAGAGGAGGGAAATGA 1539 0.4704 MGCCQSSNRRNNKKSKNNNNNNNSNSKNNPHSQHAVAASTSNGADNAVTGAALDVPPFSEFSLSDLKSATNGFSSDHIVSESGDKAPNVVFKGRLHNHNRRLIAVKRFSKLAWPDPKQFADEAWSVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWSMRLRVALSITEALDYCSNKGHPLYHDLNAYRVLFDENGDPRLSCFGLIKNSRDGKSYSTNLAYTPPEYMRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALEMIRGKNILLLMDSHLEGNFSNDEATVVFDLASQCLQYEPRERPKIKDLVTTLSKLQNKPDVPSYVMLGIPKHEEAPPTPQHPLSPMGDACSRMDLTAIHQILLMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTSIECYSQFIDVGTMVSPTVYARRSLCYLFCDQPDAALRDAMQAQLVYPDWSTAFYMQAVALSKLNMDKDAADMLNEAAALEEKRQRGGK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2335 512 Gene3D Tetratricopeptide repeat domain 403 510 IPR011990 GO:0005515
Dod09g2335 512 SUPERFAMILY Protein kinase-like (PK-like) 56 340 IPR011009 -
Dod09g2335 512 Gene3D Transferase(Phosphotransferase) domain 1 155 346 - -
Dod09g2335 512 Gene3D Phosphorylase Kinase; domain 1 51 153 - -
Dod09g2335 512 Pfam Protein tyrosine and serine/threonine kinase 89 329 IPR001245 GO:0004672|GO:0006468
Dod09g2335 512 MobiDBLite consensus disorder prediction 1 41 - -
Dod09g2335 512 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 511 IPR045845 GO:0004672|GO:0009742
Dod09g2335 512 SUPERFAMILY TPR-like 408 505 IPR011990 GO:0005515
Dod09g2335 512 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 511 - -
Dod09g2335 512 ProSiteProfiles Protein kinase domain profile. 76 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2335 512 Coils Coil 486 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2335 Dod-Chr9 44559197 44564846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2335 5 356 Glycoside Hydrolase AT3G07070 31.034 1.96e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod09g2335 PK_Tyr_Ser-Thr 1.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2335 K14500 - tcc:18591677 865.144