Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2322 ATGGGAGATACAGAGAGTTGCGGTAGCCGAGTTTGCAGTTCTTGGTGGAATCAGAGTCAAAAGCAGAGGCAGAAGGTTGAAGTATACAACGAGGTTCTTACTCGACTTCGGGAATTGAATGTCCCAGAGGTTGCTGTTCCTGGGTTTGAGGATGAGCTTTGGGCACACTTCTATCGCCTTCCCACTAGATATGCGTTGGACATGAATGTGGAGAGGGCCCAAGATGTACTTATGCATAAAAGGTTACTGCACATGGCAAGAGCACCTACTACTGCGACAGGGCCTGCAATTGAAGTCCGTCTTGTACAGGTGATTTATTCTTTATTTTTCTCTTTCTTTCTCAGCTTGCATCCACCTCCGGCCTTCGGTTCATCAGCTAACCTTGAGGATAGGAATAAATATCTGAATTTTTATGCACATTATGCCCGGCCAATGCATGAAATCACAATTTCAATAAATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCTTTAATGTCTGAGACTGGACTGGACATTCAAGAAGGACATGCTTTTTCGACATTGGATGGCTATTCATTGGACGTTTTTGTTGTTGGTGGTTGGGCAGTTGAGAAGCAACCTCAGTTGAAAGAAAATGGCACTATTCCTACAGCAGAGCAAGAGATAACTGGGATCAACTTTATCTCTAGTCATGTAAATTTTCCCACTTGTGGAAATGATGTCTGGGATGCAAGATGTTTGAGATACGAAAAGAAAATTGCATCTGGAACTTACAGTGACCTGTATAAGGGTACTTTCTGTAATCAAGATGTGGCTATCAAAGTCCTTAAGGCTGAGAATTTGAATGAAAATATACAGAAGGAGTTTTATCAAGAAGTCTGTATCCTAAGTAAAATTCAACACAAGAATGTTGTCAGATTTATTGGCGCCTGTACAAAACCTCCAAACCTTTACCTTGTCACAGAATATATGTCTGGTGGGAGTATGTATGACTTTCTTCATATACAGAAGGCTGCCCTTGCTCTTCCATCCTTGCTCAAACTAGCCATTGATGTTTCAGAAGGAATGAAATATTTGCATCAGAATAATATCATTCATCGGGACCTCAAAGCAGCTAATCTGTTGATAGATGAGAAAGGAGTGGTTAAGGTTACTGATTTTGGGGTAGCTAGAGTGCACAATCAATCAGGTATCATGACTGCGGAGACTGGAACTTATCGCTGGATGGCTCCAGAGGTGATTGAACACAAACCATATGATCACAAAGCTGATGTTTTCAGCTTCGGCATTGTTCTTTCGGAGCTGCTCACTGGAAAGCTCCCTTATGAGCATTTGTCCCCATTGCAAGCAGCAATTGGAGTGGTGCAAAAGGGTTTAAGGCCAAAAATTCCAAGGCATACTCATCCAATGTTGGTGGAATTGCTTCACCGGTGCTGGCACCAAGATCCAACTTTAAGACCCAACTTCTCTGAAATTCTGGAATTTCTGCTGCACATGACCATGATGGTTAATGGGAAAGGTGAAGGCAAAGGTAATGCATAA 1524 0.4219 MGDTESCGSRVCSSWWNQSQKQRQKVEVYNEVLTRLRELNVPEVAVPGFEDELWAHFYRLPTRYALDMNVERAQDVLMHKRLLHMARAPTTATGPAIEVRLVQVIYSLFFSFFLSLHPPPAFGSSANLEDRNKYLNFYAHYARPMHEITISINDKPKLLSQLTSLMSETGLDIQEGHAFSTLDGYSLDVFVVGGWAVEKQPQLKENGTIPTAEQEITGINFISSHVNFPTCGNDVWDARCLRYEKKIASGTYSDLYKGTFCNQDVAIKVLKAENLNENIQKEFYQEVCILSKIQHKNVVRFIGACTKPPNLYLVTEYMSGGSMYDFLHIQKAALALPSLLKLAIDVSEGMKYLHQNNIIHRDLKAANLLIDEKGVVKVTDFGVARVHNQSGIMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLSELLTGKLPYEHLSPLQAAIGVVQKGLRPKIPRHTHPMLVELLHRCWHQDPTLRPNFSEILEFLLHMTMMVNGKGEGKGNA* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2322 507 SMART serkin_6 241 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2322 507 SUPERFAMILY Protein kinase-like (PK-like) 229 490 IPR011009 -
Dod09g2322 507 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 494 - -
Dod09g2322 507 SUPERFAMILY ACT-like 145 194 IPR045865 -
Dod09g2322 507 Gene3D Phosphorylase Kinase; domain 1 237 319 - -
Dod09g2322 507 Gene3D Transferase(Phosphotransferase) domain 1 320 502 - -
Dod09g2322 507 ProSiteProfiles Protein kinase domain profile. 241 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2322 507 PRINTS Tyrosine kinase catalytic domain signature 352 370 IPR001245 GO:0004672|GO:0006468
Dod09g2322 507 PRINTS Tyrosine kinase catalytic domain signature 398 408 IPR001245 GO:0004672|GO:0006468
Dod09g2322 507 PRINTS Tyrosine kinase catalytic domain signature 315 328 IPR001245 GO:0004672|GO:0006468
Dod09g2322 507 PRINTS Tyrosine kinase catalytic domain signature 417 439 IPR001245 GO:0004672|GO:0006468
Dod09g2322 507 PRINTS Tyrosine kinase catalytic domain signature 461 483 IPR001245 GO:0004672|GO:0006468
Dod09g2322 507 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 494 - -
Dod09g2322 507 ProSiteProfiles ACT domain profile. 147 224 IPR002912 -
Dod09g2322 507 Pfam Protein tyrosine and serine/threonine kinase 242 490 IPR001245 GO:0004672|GO:0006468
Dod09g2322 507 CDD STKc_MAP3K-like 247 490 - -
Dod09g2322 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2322 Dod-Chr9 44457776 44464513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2322 5 490 MAP Kinase Kinase Kinase AT4G35780 55.701 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod09g2322 PK_Tyr_Ser-Thr 6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2322 - - aprc:113864606 802.357