LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g2303	ATGGTTACCACCACGGCTGATTCTTCTTCTAACCATCACTCCCCAACTGCAGCCGCCACCGCCACCGCCACCGCCACCACTGCTGCCTCTGCAGACCCCGTCACTGTCACAAACAACCCTAGCTTCCCGCGAAAAAACCTGCCTTCTCCATGGGCTCAAGTTGTTCGCGGCCCCGACACTGAGTCACCCTCCGCGGCTTACCAATCGCCGCCGTCATCGTCCTCCTCTTCCTCCTCTCTCTCCACCTCTGCGGCTGACCAACGGGCGCCGTCCTCCGATCCCTCGCCGCCAGTCGAGAACGCCAATTCTGATGGCGCCGCCGCCGCCGCCGCAGCTGCTGTAGATAGCTCCGATGCCGATAAGGCCAACAACAACAGCAACAACAACAATGCTGCTGGTCGCCCGAAGAAACCTGCATGGAAGAGGCCCTCGAATGGCGTGGCTGATTCTGCTTTAAATGTAATGGGTGCTGTCTCCTGGCCACCTTTATCGGAGTCCACCAAGCCTTTCGCTAAGTCGACACCTGAGCCCTCCTCCCCCAACAAGACTGCTTCCGATGGATCACTCCCCACACCTCAGGCGCATGTTACTTCGCACCCACCTCAGAAGCAACCTGCACATAATGCAAAGCCTAATCCTGGTCCGAGTTATGGTGTGGCGAATAGACAAAGAATGATGAAGCGTGGAGGTGGCAACAGCATTGGGCCTGGTCATGCACAGAGCAACTTTTCTGGTCCTCCACCACCGCCACCCTTCCCTGTACTTCAGATCCCTCCCAGTACCTTTGGCAATGGGGTACCTGGGGTTCCAGACCCTTCTCCAAGAGATCATTACAGGAACAATAACTGGGGTCCAAGGACACCAGTTGGGGGCTTTGTGCCGCCAATGATTGAACAGCGGAGTCCCTCTCGTAGGGGTAATTTTGGGCACCATCCACGTGGTGATGGTTCCTATCATAATAATTATGGCAACAGGCGTGATCAGGATCACGGAAATTATCCCCATGCTAGAGATCCTCATTTACACCCACCGAGGGCATATGCAAGGGGAATAATGAGGCCCCCACCACCTAACGCCCCTTCATTTATGGGGCCTCAGCCTATGCGACCGTTTGCAAACCCTGCTGCGTTTCCTGAATTCTATTATTTTCCAACGTCACAATTTGAACCTTTTGGGGGTATGCCGTTCTTTACCCATGGACCTCCTGCTGCAATGTTCTACCCTGTTGAAAAAATGCCTCTGAACAATATGATAGTCAACCAAATTGATTATTACTTCAGTGATGCTAATTTAGTGAAAGATGAGTTTCTACGATCCAACATGGATGAACAAGGTTGGATTCCAATTACTTTGATTGCAAGCTTCCCTCGGGTTAAAAGTTTGACTAGCAGCATTGAGGTGATACTGGATTCAATGAGAACTTCCACTGTCGTGGAAGTGCAGGGTGATAAGTTGAGAAGGTGTAATGAGTGGATGAAGTGGCTGCCCTCTGCTCCGCGTCGGGCTGATTCTGGTTCAACATCCCCTGGTGGATCAAGTTCCAATAACCCAGCAGCTGATTTTGAAAAGATCATTTTGAATGAAGCAACCGCAGAGAGAGTTAATTCAGACCTTACCACAAATGGTGAGGACGATGCTACTGAGGAATCTTCCAGTCAGTTTGAACTCCCAAACGGTGATGCTACCAGGGGCAGCAGTTAA	1701	0.5191	MVTTTADSSSNHHSPTAAATATATATTAASADPVTVTNNPSFPRKNLPSPWAQVVRGPDTESPSAAYQSPPSSSSSSSSLSTSAADQRAPSSDPSPPVENANSDGAAAAAAAAVDSSDADKANNNSNNNNAAGRPKKPAWKRPSNGVADSALNVMGAVSWPPLSESTKPFAKSTPEPSSPNKTASDGSLPTPQAHVTSHPPQKQPAHNAKPNPGPSYGVANRQRMMKRGGGNSIGPGHAQSNFSGPPPPPPFPVLQIPPSTFGNGVPGVPDPSPRDHYRNNNWGPRTPVGGFVPPMIEQRSPSRRGNFGHHPRGDGSYHNNYGNRRDQDHGNYPHARDPHLHPPRAYARGIMRPPPPNAPSFMGPQPMRPFANPAAFPEFYYFPTSQFEPFGGMPFFTHGPPAAMFYPVEKMPLNNMIVNQIDYYFSDANLVKDEFLRSNMDEQGWIPITLIASFPRVKSLTSSIEVILDSMRTSTVVEVQGDKLRRCNEWMKWLPSAPRRADSGSTSPGGSSSNNPAADFEKIILNEATAERVNSDLTTNGEDDATEESSSQFELPNGDATRGSS*	567

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	62	99	-	-
	Dod09g2303	566	PANTHER	LUPUS LA PROTEIN-RELATED	62	550	IPR045180	-
	Dod09g2303	566	SMART	la	412	488	IPR006630	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	1	148	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	160	341	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	118	133	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	498	566	-	-
	Dod09g2303	566	Gene3D	-	406	496	IPR036388	-
	Dod09g2303	566	ProSiteProfiles	La-type HTH domain profile.	408	497	IPR006630	-
	Dod09g2303	566	SUPERFAMILY	"Winged helix" DNA-binding domain	405	496	IPR036390	-
	Dod09g2303	566	Pfam	La domain	418	473	IPR006630	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	551	566	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	501	520	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	1	46	-	-
	Dod09g2303	566	CDD	LAM	416	487	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	242	257	-	-
	Dod09g2303	566	PANTHER	LA-RELATED PROTEIN 1B	62	550	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	320	341	-	-
	Dod09g2303	566	MobiDBLite	consensus disorder prediction	166	205	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g2303	Dod-Chr9	44263999	44268298	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g2303	K18757		-	gmx:100775279	614.379

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod08g2300	08	51057788	51062453	Dod09g2303	09	44263999	44268298	PCT