Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2259 ATGCGTGGACTGCACAAATCGAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGTTATTCTTATCAGAGGAATCTCCTTCACTAGTTGGGTTGAATTCTCAAGATCACCTCCAAGCAAAGACATCGTTGCTGTTGCATCCAGGTGGAGCAAGTTCTGATGACATTCTACCTCCTGGCTTTGAGGGACCTCATACTTCAAGCCAGTTTGAGATTAAGCTGTCCCAAATACCAGTGATTAGTTGGATTAATCCACCCAAGATTATGCTCAATCTCACGTGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGACCAACATCGAAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGTCCATCCTCCATTCCTCCAAACCCATCCGTTTCAGTGGATGTTGAAGCTTCCCATTGCATGGATGGCCAAACTACCTTGATACCAATCACACCTATTGAAGATGAAGATGCTGCAACGGATGCATTTTCTGATTCGATGGCACCATCTGATTCTTTTGAATTACCTCCTGGCATACCAAATGGTCCAAACTCTCATGCAAGTATGCAGTTAGCTCATGGTGCAATTTCTGCTGCATCTATTGCTTTAACTAATTTGATGAAGAGTAACGAGCATGGAAATTTGATTGATCATGAATTACTCAATAATATTCTCAAAAATCCAGAGGTGGTTGAGAAATTGGTCAAAGATTATGGAGCTGCTAATAATTTGCAGTGTGCACATACTGCGGGGTTATCTTCAGCGGCATTATCACATCCATCTCTTCCTGTAAACCAAGGAGAAACCAGTACACCTTCGCCCGTTGTTTTTTCAGCTACTTCCCCCCATCCTCCTCCTGGTGAAAATCAAGTGGGACCCATATCTTCTCAATGGCTTCCTAAGCATGTAGTGAGTCCGCCTACAATTTCTTCTGCTGCAGAAGTATCTTTGCCAAAGGATGTAAGCTACTATAAAAGCTTAATTCAGCAACATGGAGAAGAAAGACAAGAACAACATCCATACTCGAGTAACCGTCAAATCCAGCGCCCAATAATCAACCATGAGACATCACACAACTCTAGATCAAGGGAATCAAAACCAAAGATAATGAAACCTTGTATCTTCTTTAACAGTTCCAGAGGATGTCGAAATGGAGCCAATTGTGCATACCAACATGATGCAGCATTTCAGTCACGAGGTAGTGCTGTGCCAGGGATACAAAGTTCAAAGCGAATGAAAATGGATAGTGAGATTAGCAGTTAG 1275 0.4275 MRGLHKSKRVSWASDLDLCQVRLFLSEESPSLVGLNSQDHLQAKTSLLLHPGGASSDDILPPGFEGPHTSSQFEIKLSQIPVISWINPPKIMLNLTWQVVAGEESKEVEDQHRREMRVLEAIYPRPSSIPPNPSVSVDVEASHCMDGQTTLIPITPIEDEDAATDAFSDSMAPSDSFELPPGIPNGPNSHASMQLAHGAISAASIALTNLMKSNEHGNLIDHELLNNILKNPEVVEKLVKDYGAANNLQCAHTAGLSSAALSHPSLPVNQGETSTPSPVVFSATSPHPPPGENQVGPISSQWLPKHVVSPPTISSAAEVSLPKDVSYYKSLIQQHGEERQEQHPYSSNRQIQRPIINHETSHNSRSRESKPKIMKPCIFFNSSRGCRNGANCAYQHDAAFQSRGSAVPGIQSSKRMKMDSEISS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2259 424 ProSiteProfiles Zinc finger C3H1-type profile. 371 399 IPR000571 GO:0046872
Dod09g2259 424 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 419 - -
Dod09g2259 424 MobiDBLite consensus disorder prediction 345 359 - -
Dod09g2259 424 MobiDBLite consensus disorder prediction 335 370 - -
Dod09g2259 424 MobiDBLite consensus disorder prediction 403 424 - -
Dod09g2259 424 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2259 Dod-Chr9 43894735 43900220 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dod09g2259 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2259 - - adu:107460053 631.328