Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2253 ATGGCAGAAGACATCAGCAAAAACGACGTCGGATTATCTCCGAAAACGAGACGGCTGTGGCCTTCTGTCCTCCGTTGGGTTCCCACTTCGACGGAACACATCATCGCTGCCGAGAAGCGCCTTCTTTCTCTCGTCAAGACTCCCTATGTTCAAGAACATGTTAATATTGGCTCTGGCCCTCCTGGCTCTAACGTTAGATGGTTCCGCTCATCAAGCACCGAGCCACGGTTCATTAACACTGTCACATTTGACAGTGCAGATGATTCTCCTACGCTTGTAATGGTTCATGGATATGCTGCTTCCCAGGGTTTCTTCTTTCGCAATTTTGATGCTCTTGCTAGTCGTTTCAGAGTAATTGCTGTTGATCAACTCGGTTGGGGTGGATCAAGCAGACCTGATTTTACATGCAAAAGCACTGAAGAAACTGAAGCGTGGTTCATTGATTCTTTTGAAGAATGGAGAAAAGCCAAAAACCTGACCAATTTTATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCTAAATATGCACTCAAGCACCCTGAGCATGTAAAGCACTTGATTTTGGTGGGACCTGCTGGATTTTCATCAGAATCAGATGCAAAGTTTGAGTGGATTACAAAGTTTCGAGCAACTTGGAAAGGAGCAGTTCTGAACCATCTATGGGAGTCTAATTTTACACCTCAAAAACTTATCCGAGGTTTAGGTCCTTTGGGTCCTAATATAGTCCGCAGGTATACAAGTGCTCGGTTTGGTACATATTCAACTGGGGAAATACTGACTGAAGAGGAATCAAGATTGTTGACAGATTATGTGTACCATACATTAGCGACCAAAGCTAGTGGGGAGCTTTGCTTAAAGTATATATTTTCATTCGGAGCATTTGCTAGGAGTCCCCTTCTTCACAGTGCCTCAGAGTGGAAGGTGCCCACCACTTTCATATTTGGTTTCCAAGACTGGATGGATTATCAAGGGGCCCAAGACGCTCGCACGCATATGAAGGTTCCATGTGAAATCATCAGGGTCCCCCAGGCCGGCCACTTTGCGTTCATTGACAACCCAAATGGCTTCCATTCAGCCGTGCTTTATGCTTGTCGAAGGTTTCTGAGACCTGATCCAGACAATGAATCTCTTCCTGAAGGGCTAACTGCTGCATAG 1161 0.4531 MAEDISKNDVGLSPKTRRLWPSVLRWVPTSTEHIIAAEKRLLSLVKTPYVQEHVNIGSGPPGSNVRWFRSSSTEPRFINTVTFDSADDSPTLVMVHGYAASQGFFFRNFDALASRFRVIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLTNFILLGHSFGGYVAAKYALKHPEHVKHLILVGPAGFSSESDAKFEWITKFRATWKGAVLNHLWESNFTPQKLIRGLGPLGPNIVRRYTSARFGTYSTGEILTEEESRLLTDYVYHTLATKASGELCLKYIFSFGAFARSPLLHSASEWKVPTTFIFGFQDWMDYQGAQDARTHMKVPCEIIRVPQAGHFAFIDNPNGFHSAVLYACRRFLRPDPDNESLPEGLTAA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2253 386 PRINTS Epoxide hydrolase signature 343 365 IPR000639 GO:0003824
Dod09g2253 386 PRINTS Epoxide hydrolase signature 115 130 IPR000639 GO:0003824
Dod09g2253 386 PRINTS Epoxide hydrolase signature 310 326 IPR000639 GO:0003824
Dod09g2253 386 PRINTS Epoxide hydrolase signature 178 191 IPR000639 GO:0003824
Dod09g2253 386 Gene3D alpha/beta hydrolase 76 367 IPR029058 -
Dod09g2253 386 Pfam alpha/beta hydrolase fold 90 213 IPR000073 -
Dod09g2253 386 PANTHER RE40534P-RELATED 18 373 - -
Dod09g2253 386 SUPERFAMILY alpha/beta-Hydrolases 79 363 IPR029058 -
Dod09g2253 386 PRINTS Alpha/beta hydrolase fold signature 115 130 IPR000073 -
Dod09g2253 386 PRINTS Alpha/beta hydrolase fold signature 178 191 IPR000073 -
Dod09g2253 386 PRINTS Alpha/beta hydrolase fold signature 164 177 IPR000073 -
Dod09g2253 386 PANTHER BNAA01G13630D PROTEIN 18 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2253 Dod-Chr9 43821484 43824871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2253 70 197 Acyl Lipid Metabolism Gene Families AT1G64670 33.577 2.11e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2253 - - gmx:100791981 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2237 08 50132279 50145743 Dod09g2253 09 43821484 43824871 PCT