Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2252 ATGGCAACAACGGCTATATTTCTTGCCTTCACGGCGTTGGCATACTTCACCACATTAACCGTTACTTTAACGTGCGCCCAACCCCAACAACGAAGGACCGCCGTAACCGTGACGGAGATCGAAGCATTAACGGCGTTCAAGCGGAACCTCCGTGATCCTCTGGGCGCATTGGACGGCTGGGATCCTTCCACGGCGTCTGCTCCGTGCGACTGGCGCGGCGTCCTGTGTTACAACCACCGAGTCCGCGACCTCCGCCTGCCGCGCCTCCAACTCGGTGGCCAACTCAGCGACTCGCTCTCGAGACTCACCCAGCTCCGGAGGCTGAGCCTCCACTCTAACAACCTCAACGGCCACATCCCTCCCTCGCTCTCCAACTGCCTCTTCCTCCGCGCCGTCTACCTACACAACAATTCACTCTCCGGCCACCTTCCGCTGCCGCTCCTCAACCTCACCAACCTCCAGGTCCTCAACCTCGCACACAACCTCCTCTCCGGCACACTCTCCGGCGACCTCGCCACCTCCATCCGGTACCTCGACTTGTCGTCCAACGCATTCTCCGGCGACATTCCGGCCAACTTCTCCTCCAAATCTCAGCTTCAGCTCATCAACTTGTCCTTCAACGGTTTCACCGGCGGGATTCCGGTCACCGTCGGAGCGCTGAAGAATCTCGAGTATCTATGGCTGGACTCTAACAACTTGCATGGGACATTGCCTTCGGCGCTTTCAAACTGCACCAACCTCGTTCATCTCAGTGCAGAGGGGAATGCCATCGGAGGGTTGATCCCTTCCACAATGGGAACAATGCCGAAGCTTCAAGTGCTGTCGCTTTCGATGAATATGCTTTCGGGTTCGGTCCCCACTTTGCTTTTGTGCGGTTCTTCGTCTCTGCGATTTGTTGAGCTTGGCTTTAATGCACTCACGGGAGTTTCGGATCCGCAAGGTGGAAAATGTCTTAGCGTCTTAGAGGTTTTGGACCTTAAGCAGAATCACATTGTTCACGCTTCGTTTCCCTCTTGGTTCACCAGTGCCACGTCGCTGAAAGTTCTCGATCTTTCTGGAAATTCGTTTTCTGGCACTTTGCCTGGGGATATTGGAAGCCTCTTCATGTTGGAGGAACTGAGAGTGGCCAATAATTCGTTGTATGGTGAGGTCCCAAGCGGCATTGTGAATTGTGGGTTGTTAAGGGTTCTTGATCTTCAGGGGAACAAGTTTTCTGGTCCTATTCCTTCGTTTCTTGGGCAGTTGAGTGGCTTAAAGGTGTTATCTCTTGGTGGTAACGTGTTTACTGGTTCTATACCCGCCAGCTATGGAACACTCTCTGCGCTTGAGACTTTGAATCTAAGCAATAATAAACTTACTGGGATTGTGCCTAGGGAGATCATGCAGTTAGGGAACGTGACTGCTTTGAATCTCAGCAACAACAGATTCTCAGGCCAAGTTTCGTCTGATACTGGGGACTTGAAAGCTTTGGAGGTTCTTAATTTGAGTCACTGTGGGTTCTCCGGAAGGGTTCCTGCTGCACTTGGTAGTTTGATGAAACTAACGGTGTTGGATTTAAGCAAGCAAAACCTTTCTGGTGAATTGCCTGTTGAGCTTTTTGGGTTGCCTAGTTTGCAAGTTGTTGCATTTCAGGAGAACCACCTGAGTGGTGCTGTTCCTGAGGGTTTCAGCAGCATTGTTAGTCTACGGTATCTTAATCTCAGCTCCAATGCATTTGTTGGGAACATTCCACCAACCTATGGATTCCTCAGTTCCTTGAATGTTCTCTCTTTGTCCCACAATGGTATTTCTGGTTCGATACCTTCAGAGATTGGTGATTGTTCTCAACTTGAAGTGCTGGAGCTGCAGTCAAATCGTTTGGAGGCTAACATTCCAAGTGATATCTCGCGTCTTTCGAGTTTAAAGGAGCTCAATTTGGGACACAATAGATTGAAAGGTGATATCCCTGATGGAATATCACAATGTTCTGCTCTGAATTCACTCTTGTTGGATGGTAATCATTTAACGGGTCATATACCAGAATCCTTTTCCAAGTTATCAAACTTGACCTCTTTGAACCTTTCTTCAAATCAATTGAGTGGAGAAATTCCAGTGAGTCTCTCACGCATTAATGGTTTGAAGTATTTAAATCTGTCCAACAATGATCTTGAGGGGGAGATCCCACAAATGCTTGGTTCTAGATTCAATGACCCTTCCGTGTTTGCAATGAACCAGAGGCTTTGCGGAAAGCCTTTGCACAGAGAGTGTGCAAATGTAAGAAGGCGAAAGAGGAGAAGATTGATGATCTTCATAGGCGTGGCTGTTGCTGGACTATGCATTTTGGGGCTATGTTGCTGTGGCTATGTTTACAGTCTCTTGAGGTGGCGCAACAAGCTTAGAGAAGGGGTAACTGGTGAGAAGAAAAGGAGCCCCACAAGTGCAAGCTTGGGAGCAGAAAGGGGAAGAGGGAGTGGGGAAAATGGGGGGCCCAAGCTGGTAATGTTCAACAACAAGATCACCCTTGCGGAGACATTGGAAGCAACAAGAAACTTTGATGAGGAGAATGTGTTGAGCAGAGGAAGATATGGTCTTGTGTTCAAAGCCTCCTTCCAAGATGGGATGGTTCTCTCCATTCGCCGCCTCCCCGATGGATTCCTCGATGAGGGCGCATTCCGCAAAGAGGCAGAATCACTAGGCAAAGTGAAGCATCGCAATCTAACAGTTCTGCGTGGCTACTATGCAGGACCACCTGATGTGAGGCTTCTTGTGTATGACTACATGCCAAATGGGAACCTAGGGACACTGCTTCAAGAAGCTTCCCAGCAAGATGGCCATGTGCTGAATTGGCCAATGCGCCACCTCATTGCACTAGGCATTGCTCGAGGGCTAGCATTCTTGCACTCGGTGCCAATAGTTCATGGTGATGTGAAGCCTCAAAATGTCCTCTTTGATGCAGATTTTGAGGCCCATTTGTCGGAATTTGGGTTGGACAGGTTAACAATAGCAACACCAGCAGAAGCATCATCATCATCAACACCAGTTGGTTCATTAGGCTATGTGTCGCCAGAAGCTGCATTAACGGGGCAAGCAACAAAGGAGGCAGATGTTTACAGCTTTGGGATTGTGTTGTTGGAGATACTGACAGGGAGGAAGCCAGTGATGTTCACGCAAGATGAAGACATAGTGAAGTGGGTGAAGAGGCAGCTACAACGGGGACAGATTTCGGAGCTGTTGGAGCCTGGTTTGCTTGAGATAGACCCAGAGTCATCGGAATGGGAAGAGTTCTTGTTGGGCATCAAGGTGGCTCTTCTGTGCACAGCGCCTGACCCTCTTGGTCGCCCTTCCATCGCTGACACTGTTTTCATGCTCGAACGTTGCCGGGCCGGCCCTGAGATCCCATCCTCTGCTGATCCCACAACATTACCTTCTCCTGCATGA 3417 0.4969 MATTAIFLAFTALAYFTTLTVTLTCAQPQQRRTAVTVTEIEALTAFKRNLRDPLGALDGWDPSTASAPCDWRGVLCYNHRVRDLRLPRLQLGGQLSDSLSRLTQLRRLSLHSNNLNGHIPPSLSNCLFLRAVYLHNNSLSGHLPLPLLNLTNLQVLNLAHNLLSGTLSGDLATSIRYLDLSSNAFSGDIPANFSSKSQLQLINLSFNGFTGGIPVTVGALKNLEYLWLDSNNLHGTLPSALSNCTNLVHLSAEGNAIGGLIPSTMGTMPKLQVLSLSMNMLSGSVPTLLLCGSSSLRFVELGFNALTGVSDPQGGKCLSVLEVLDLKQNHIVHASFPSWFTSATSLKVLDLSGNSFSGTLPGDIGSLFMLEELRVANNSLYGEVPSGIVNCGLLRVLDLQGNKFSGPIPSFLGQLSGLKVLSLGGNVFTGSIPASYGTLSALETLNLSNNKLTGIVPREIMQLGNVTALNLSNNRFSGQVSSDTGDLKALEVLNLSHCGFSGRVPAALGSLMKLTVLDLSKQNLSGELPVELFGLPSLQVVAFQENHLSGAVPEGFSSIVSLRYLNLSSNAFVGNIPPTYGFLSSLNVLSLSHNGISGSIPSEIGDCSQLEVLELQSNRLEANIPSDISRLSSLKELNLGHNRLKGDIPDGISQCSALNSLLLDGNHLTGHIPESFSKLSNLTSLNLSSNQLSGEIPVSLSRINGLKYLNLSNNDLEGEIPQMLGSRFNDPSVFAMNQRLCGKPLHRECANVRRRKRRRLMIFIGVAVAGLCILGLCCCGYVYSLLRWRNKLREGVTGEKKRSPTSASLGAERGRGSGENGGPKLVMFNNKITLAETLEATRNFDEENVLSRGRYGLVFKASFQDGMVLSIRRLPDGFLDEGAFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLDRLTIATPAEASSSSTPVGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQRGQISELLEPGLLEIDPESSEWEEFLLGIKVALLCTAPDPLGRPSIADTVFMLERCRAGPEIPSSADPTTLPSPA* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2252 1138 Gene3D Ribonuclease Inhibitor 474 758 IPR032675 -
Dod09g2252 1138 Gene3D Ribonuclease Inhibitor 195 311 IPR032675 -
Dod09g2252 1138 ProSiteProfiles Leucine-rich repeat profile. 441 462 IPR001611 GO:0005515
Dod09g2252 1138 Gene3D Phosphorylase Kinase; domain 1 820 919 - -
Dod09g2252 1138 Pfam Leucine rich repeat 438 476 IPR001611 GO:0005515
Dod09g2252 1138 Pfam Leucine rich repeat 321 380 IPR001611 GO:0005515
Dod09g2252 1138 Pfam Leucine rich repeat 657 716 IPR001611 GO:0005515
Dod09g2252 1138 Pfam Leucine rich repeat 513 571 IPR001611 GO:0005515
Dod09g2252 1138 Gene3D Ribonuclease Inhibitor 387 473 IPR032675 -
Dod09g2252 1138 MobiDBLite consensus disorder prediction 797 821 - -
Dod09g2252 1138 PANTHER LRR RECEPTOR-LIKE KINASE 13 1134 - -
Dod09g2252 1138 SMART LRR_sd22_2 583 615 - -
Dod09g2252 1138 SMART LRR_sd22_2 679 700 - -
Dod09g2252 1138 SMART LRR_sd22_2 220 246 - -
Dod09g2252 1138 SMART LRR_sd22_2 150 180 - -
Dod09g2252 1138 SMART LRR_sd22_2 631 654 - -
Dod09g2252 1138 SMART LRR_typ_2 631 655 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 220 244 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 102 126 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 318 342 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 367 391 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 268 291 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 583 607 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 463 487 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 535 558 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 150 173 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 439 462 IPR003591 -
Dod09g2252 1138 SMART LRR_typ_2 679 703 IPR003591 -
Dod09g2252 1138 SUPERFAMILY L domain-like 317 551 - -
Dod09g2252 1138 SUPERFAMILY L domain-like 37 331 - -
Dod09g2252 1138 SUPERFAMILY Protein kinase-like (PK-like) 824 1127 IPR011009 -
Dod09g2252 1138 SMART serkin_6 844 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2252 1138 Gene3D Ribonuclease Inhibitor 312 386 IPR032675 -
Dod09g2252 1138 Gene3D Transferase(Phosphotransferase) domain 1 920 1126 - -
Dod09g2252 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Dod09g2252 1138 ProSiteProfiles Protein kinase domain profile. 844 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2252 1138 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Dod09g2252 1138 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 1134 - -
Dod09g2252 1138 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Dod09g2252 1138 Pfam Protein tyrosine and serine/threonine kinase 847 1063 IPR001245 GO:0004672|GO:0006468
Dod09g2252 1138 PRINTS Leucine-rich repeat signature 442 455 - -
Dod09g2252 1138 PRINTS Leucine-rich repeat signature 679 692 - -
Dod09g2252 1138 Gene3D Ribonuclease Inhibitor 36 194 IPR032675 -
Dod09g2252 1138 SUPERFAMILY L domain-like 490 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2252 Dod-Chr9 43814339 43817771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2252 1 1138 Receptor kinase-like Gene Family AT1G75640 64.429 0.0 1365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Dod09g2252 PK_Tyr_Ser-Thr 9.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2252 - - gmx:100784917 1667.9