Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2226 ATGTCCAACTCCATTACCAATCAAACCCAATTTGAGAGCCAAGAGCTAGATGCGTATGGTTCTTCTTTGAGAACCAACAATGCATTCACCGAGGCCCTAGGAGCGTTTCCCAGCATTCAATCTATTGGAGACAGAATGTCAAGATCAGTGGACCTTGTGCAAGCTCCCGTACTAGCTGAGGGCTCAGAGATGAGCCACACAAGGCATTTGATGGATCTTCTAGGAGCTGCTAATGAGAGCAGTCACCAACCTCAGGGCCTCTCTCTTTCTTTAGGCTCTCACATGATTGTCCCTTCTGATGAATACAGGCATAGATCCTTAATTCCGGGTCTCATGAACCCCAATTACTTCATGCCTGGACATGAGGCAAGGGAAGCTTGTAATCCGGCAGTTGAGCATCTAACCAGTGACTACTTCTTCACCAGTACCCCTTTTGCTTCATCTTCTGCTTCATTGAACCGTTCTCCTTCCACCTCTTATGGAACTGAGTCTTTTGCTGCTGTCATTGGGAACTCAAGATACCTCAAGCCAGTACAGTCGCTCCTTGAAGATCTTGTTGATGTTGGTGGAAATGTGGTTGATAGAATCAATGAAAAGTATGTGGAGAAGTTATTCCACGGGGGAAGAGCCAGTGCCCGGGCACTTTCCTCAGAGTTGAAGGCAGAGTTGAGGAATAATGGACCTTTATTGGCTGAGAAGCAAGAGCATCAAATGAAAATCGCAAAGTTGATTGCTTTGTTGGATGAGGTGGAGGGCAGATATGAGAAATACTACCATCAAATGGAAGAAGTGGTGTCATCCTTTGAGTTGATAGCAGGTCTAGGAGCTGCCAAGTGTTATACTGCTTTGGCACTCCAAGCCATGTCTAGACATTTCTGCAGCCTGAGGGACGCCATAGTGTCACAAATAAATCTGGAGAAAAGAAAACTCTTTCAAGATTTGCCTAAGATCAGCAGCGGATTATCTCAATTAAGTCTATTTGATAGGGACACAAGACAAAGTAGAATGTCTCTCCAGCAGCTCGGTTTGATCCAAAGCCAACGCCAAGTGTGGAGACCCATCAGAGGGTTGCCTGAAACCTCTGTAGCAATTCTTCGTTCTTGGCTCTTCGAGCACTTCCTCCACCCTTATCCTAATGATTCTGAGAAGTTAATGCTGGCGTCCCAGACAGGTTTAACTAAAAACCAGGTCTCAAATTGGTTCATAAATGCCCGGGTACGGCTATGGAAACCAATGATAGAAGAAATGTATAAAGAAGAGTTTGGAGACTCTTCAGAAGACTCCAACCCGCCTGCTAACAACTACTTGACGAGGGAAGACACTACAGACTGTGTGGAGGATTGA 1344 0.4554 MSNSITNQTQFESQELDAYGSSLRTNNAFTEALGAFPSIQSIGDRMSRSVDLVQAPVLAEGSEMSHTRHLMDLLGAANESSHQPQGLSLSLGSHMIVPSDEYRHRSLIPGLMNPNYFMPGHEAREACNPAVEHLTSDYFFTSTPFASSSASLNRSPSTSYGTESFAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINEKYVEKLFHGGRASARALSSELKAELRNNGPLLAEKQEHQMKIAKLIALLDEVEGRYEKYYHQMEEVVSSFELIAGLGAAKCYTALALQAMSRHFCSLRDAIVSQINLEKRKLFQDLPKISSGLSQLSLFDRDTRQSRMSLQQLGLIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGDSSEDSNPPANNYLTREDTTDCVED* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2226 447 SMART HOX_1 351 415 IPR001356 GO:0003677
Dod09g2226 447 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 10 429 - -
Dod09g2226 447 SUPERFAMILY Homeodomain-like 357 419 IPR009057 -
Dod09g2226 447 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 429 - -
Dod09g2226 447 CDD homeodomain 351 412 IPR001356 GO:0003677
Dod09g2226 447 MobiDBLite consensus disorder prediction 420 447 - -
Dod09g2226 447 Pfam Homeobox KN domain 368 407 IPR008422 GO:0003677|GO:0006355
Dod09g2226 447 Pfam Associated with HOX 168 300 IPR006563 -
Dod09g2226 447 Gene3D - 345 426 - -
Dod09g2226 447 Coils Coil 233 253 - -
Dod09g2226 447 ProSiteProfiles 'Homeobox' domain profile. 370 411 IPR001356 GO:0003677
Dod09g2226 447 SMART prehox3 163 301 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2226 Dod-Chr9 43540515 43543317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2226 74 426 Homeobox Transcription Factor Family AT1G19700 43.514 2.02e-84 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod09g2226 POX 8.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2226 - - gmx:100792161 689.493