Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2222 ATGGCCTCATCCGGTGGAAACTCCTCAACCACGAGCACCACCAAATTTCAGAGCTCAGGCTCTGAGGAGGAGGATTTGCAGATTCTGATGGAGGATCAAAGGAGGAACAAGAGAAAGCAATCGAACAGGGAATCAGCGAGGAGATCTAGGATGAGAAAGCAGAACCACTTGGATGATCTGATGAAGCAGGTGTGCAAGCTCACAAAGGACAACAGTGAAATCCTCACAAGCATAGACATCACCACACAGCACTATCTCACTGTTGAGGCTGAGAATTCTATCTTGAGGGCCCAGTTGGGGGAACTCAGCCAAAGGCTTCAATCACTCAATGATATCATTAGCCTCATCAACAGCACAACCACTACTGGGGCCTATGAAAGGGATTGTTATCTAACAAGTGCAGATCAAAGTTTCATCAACCCATTGATGAATATGTTCCATCATCTTAACCAACCTATTTCCGCTTCTGCAGATATATTCCAGTGGTGA 489 0.4581 MASSGGNSSTTSTTKFQSSGSEEEDLQILMEDQRRNKRKQSNRESARRSRMRKQNHLDDLMKQVCKLTKDNSEILTSIDITTQHYLTVEAENSILRAQLGELSQRLQSLNDIISLINSTTTTGAYERDCYLTSADQSFINPLMNMFHHLNQPISASADIFQW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2222 162 MobiDBLite consensus disorder prediction 1 24 - -
Dod09g2222 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 37 52 IPR004827 GO:0003700|GO:0006355
Dod09g2222 162 SUPERFAMILY Leucine zipper domain 34 88 IPR046347 GO:0003700|GO:0006355
Dod09g2222 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 32 95 IPR004827 GO:0003700|GO:0006355
Dod09g2222 162 Gene3D - 32 85 - -
Dod09g2222 162 PANTHER BZIP TRANSCRIPTION FACTOR 1 160 - -
Dod09g2222 162 Pfam bZIP transcription factor 33 79 IPR004827 GO:0003700|GO:0006355
Dod09g2222 162 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 160 - -
Dod09g2222 162 CDD bZIP_plant_GBF1 35 85 IPR045314 GO:0003700|GO:0006355
Dod09g2222 162 MobiDBLite consensus disorder prediction 1 55 - -
Dod09g2222 162 SMART brlzneu 30 94 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2222 Dod-Chr9 43512352 43513536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2222 29 162 bZIP Transcription Factor Family AT4G34590 55.396 4.69e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod09g2222 bZIP_1 7.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2222 K25786 - gmx:778188 180.259