Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2221 ATGGCGACTCCAGTTGAGCCTCCGAATGGGATCAGGGCAGAAGGAAAGCATTATTATTCCATGTGGCAAACCCTGTTTGAGATTGACACTAAGTACGACCCCATCAAGCCTATTGGTCGAGGAGCTTATGGAATTGTCTGCTCTTCCGTGAATAGAGAGACCAATGAAAAAGTTGCCATCAAGAAGATACAAAATGCCTTTGAAAACCGGGTTGATGCGCTGAGAACTTTGCGTGAGCTGAAACTTCTTCGGCACCTTCACCATGAAAATGTGATTGCTTTAAAAGACATCATGATGCCCCCTCATAGAAGTACTTTCAAGGATGTCTATCTGGTATATGATCTCATGGACACGGATCTGCATCAGATTATCAAGTCTTCCCAAGCGCTATCTAATGATCACTGTCAATATTTCCTCTTGCAGTTGCTTCGGGGCTTGAAATATCTTCACTCAGCCAATATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATTAATGCAAATTGTGATCTAAAGATATGTGATTTTGGGTTAGCACGCATTAACTGCAGCAAGAACCAGTTTATGACCGAGTATGTTGTCACTCGGTGGTATAGGGCTCCAGAGCTCCTACTCTGCTGTGACAACTACGGGACATCTATTGATGTTTGGTCTGTGGGTTGCATCTTTGCTGAGCTTCTTGGACGAAAACCTATTTTCCCAGGTTCAGAGTGTCTCAACCAGCTAAAATTGATTATCAATATCCTTGGTAGTCAAAGGGAGGAGGATATTGAATTTATTGATAATCCAAAGGCAAAGAAGTATATCAAATCTCTTCCATATTCTCCCGGAATCCCGTTGTCCCGACTTTATCCCAGTGCCCATCCATTGGCAATTGATCTACTGGCGAAGATGCTTGTCTTTGATCCATCAAAAAGGATTAGTGTCACTGAAGCACTACAACACCCTTACATGGCCTCTCTGTATGATCCTAATTCTGACCCTCCAGCCATCATTCCAATTGATCTTGACATTGATGAGGATCTAGGAGAAGAGATGATAAGGGAGATGATGTGGCAGGAAATGATTCATTATCATCCCGAATCTGCTATGATAAATGGCTAA 1107 0.4264 MATPVEPPNGIRAEGKHYYSMWQTLFEIDTKYDPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPPHRSTFKDVYLVYDLMDTDLHQIIKSSQALSNDHCQYFLLQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARINCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKKYIKSLPYSPGIPLSRLYPSAHPLAIDLLAKMLVFDPSKRISVTEALQHPYMASLYDPNSDPPAIIPIDLDIDEDLGEEMIREMMWQEMIHYHPESAMING* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2221 368 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Dod09g2221 368 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Dod09g2221 368 CDD STKc_TEY_MAPK 26 361 - -
Dod09g2221 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 364 - -
Dod09g2221 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 364 - -
Dod09g2221 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2221 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2221 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2221 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Dod09g2221 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Dod09g2221 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Dod09g2221 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2221 Dod-Chr9 43489475 43491751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2221 1 367 MAP Kinase Gene Family AT1G10210 85.286 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dod09g2221 Pkinase 2.4e-71 CL0016