Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2218 ATGGAATCTACCCGCAATCACAATCAGCCCCAAGACCATCAGCCCCCAACTGTGGAGCCTTCTTCTTTATCCACTACTACTCCTTCTTCCTGCTATGGATCACCTCTAGGCGGAACCAACTTTTCTTGGACGCCAAATATCACTAATTTGAATGCAGGTAACTACTTGGACAGAAACGTCCAAGAAGCTAACCCCAGATCAAGAGCTTTAACCGACAATAATGATATTCGGGTCCCTCCACGTCCTCTGAACGGTTCTATGATCCAAGACGATTTAGGTTATCATCATCACTGGTGGACAAGTGATATGGCACAAAGCTGGTTAACCACCAGCCAATCCACTCATCATCACTTGGGCCTGCAGTTCTCCAAGAGTAAGGAAGAGATCTCGGGTACTAGTAGTTTGGGCAAATTCAGCAGTGAGATGCTGAACATTCCTTCGAGCATGGAAGGCTATGGACTCGCTGCCACTTCCACAACCACAACAACCACCCGTATGAAGAATAATGAGCACAGAGATATGAGTGCTCTCAACGAGAAGCTCTTGCTCAAGACCCTTTTTTCTGGAGACTTCTATTCGACTAATGCTCAAAATTATCATAATTTTGGTGGTGGTCCTGCTGGGGTAACAAGCAGAGGGAACTTTAGCCAGATTTACCCCAGTGTAAATATCTCAAACTTGAACCAGCCTTCTTCTAATTATTCCACAGCAATTTCAAGCTCCCTGGACATGAGCGCGCAGTCCTTAGATCTATTAACTTCAGCAAAATCATTTAGTTCGGGTTTGAGTCATCATTCACAGCAAGATCTTGTTGGTCTTGGTAGATTTGCTGCAGACAACCTTTCTTTTCGTATTGATCATATGCTGCACCCTATTGACTTCAGGTCCTCGTGTAGTAACTCAAGTAATCCATTACACTTCACCGATGGCACGGCAGAAGCAAAGAGACCCTGCACTTCGATGGAGCCAAAGGCTTCTCAATCTCAAATGGCATCCAAGAAATCGCGATCGGAATCACGCCCTTCATGCCCACCTTTCAAGGTTAGGAAAGAGAAATTAGGAGATAGGATTGCGGCTCTTCAGCAGCTGGTGGCTCCTTTTGGTAAGACAGACACAGCATCCGTACTTATGGAGGCTATTGGTTACATTAAATTCCTTCAAAGCCAAGTTGAGGTACTTTATATTTTCCACTTTGATAGCCTGATATTTCCCTTTTGA 1218 0.4475 MESTRNHNQPQDHQPPTVEPSSLSTTTPSSCYGSPLGGTNFSWTPNITNLNAGNYLDRNVQEANPRSRALTDNNDIRVPPRPLNGSMIQDDLGYHHHWWTSDMAQSWLTTSQSTHHHLGLQFSKSKEEISGTSSLGKFSSEMLNIPSSMEGYGLAATSTTTTTTRMKNNEHRDMSALNEKLLLKTLFSGDFYSTNAQNYHNFGGGPAGVTSRGNFSQIYPSVNISNLNQPSSNYSTAISSSLDMSAQSLDLLTSAKSFSSGLSHHSQQDLVGLGRFAADNLSFRIDHMLHPIDFRSSCSNSSNPLHFTDGTAEAKRPCTSMEPKASQSQMASKKSRSESRPSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVEVLYIFHFDSLIFPF* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2218 405 MobiDBLite consensus disorder prediction 309 347 - -
Dod09g2218 405 PANTHER OS01G0105700 PROTEIN 161 395 - -
Dod09g2218 405 CDD bHLH_AtbHLH_like 344 393 IPR045239 -
Dod09g2218 405 Gene3D - 347 394 IPR036638 GO:0046983
Dod09g2218 405 MobiDBLite consensus disorder prediction 1 31 - -
Dod09g2218 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 394 IPR036638 GO:0046983
Dod09g2218 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Dod09g2218 405 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 161 395 - -
Dod09g2218 405 MobiDBLite consensus disorder prediction 62 82 - -
Dod09g2218 405 MobiDBLite consensus disorder prediction 321 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2218 Dod-Chr9 43433167 43438192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2218 102 395 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 40.373 4.24e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2218 - - lang:109326222 331.643