Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2209 ATGCCTGAAATAAAATATGGTTATAGCAAGAAAGTCTTTGAACAATTAGATGTCTACAGCTTTGGTGTTGTACTGCTAGAGCTAGTCAGTGGTAGGAAAGCCAAGCAAGCAGAGCCAAGTGAGTCCCTTGACATAGTGAAGTGGGTTAGCAGGAAAGTGAACGTCACTGATGGGGTACCCCAAGTCCTTGACCCTATAATATCACATACATGTCACCAAGAAATGGTTAGAGCATTAGATATTACTCTTAGATGCACTTCTGTGATGCCTGAGAAAAGGCCATCGATGGTAGAAGTTCTGAAAGCCTTCAGTCCCTTGAGTCAAGGACTTGCATTGCAAACTTGCACGGAACCAATGAGGAACTCAACATTCCAGTATGAAATTAACTACCAAGTTCTAATTCAAAGATAG 411 0.4161 MPEIKYGYSKKVFEQLDVYSFGVVLLELVSGRKAKQAEPSESLDIVKWVSRKVNVTDGVPQVLDPIISHTCHQEMVRALDITLRCTSVMPEKRPSMVEVLKAFSPLSQGLALQTCTEPMRNSTFQYEINYQVLIQR* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2209 136 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 112 - -
Dod09g2209 136 Gene3D Transferase(Phosphotransferase) domain 1 2 125 - -
Dod09g2209 136 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2209 136 SUPERFAMILY Protein kinase-like (PK-like) 2 102 IPR011009 -
Dod09g2209 136 PANTHER - 6 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2209 Dod-Chr9 43363996 43364599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2209 8 101 Receptor kinase-like Gene Family AT5G06940 60.204 1.36e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod09g2209 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2209 - - gmx:100305363 158.303