LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g2144	ATGTTTATTTTGCTCTGCCTAAGCGACATCCCGTTAAGCGCAAATTTAGGTGAGGAAGCAACATTTTGCCAAAATAAACCAGGCGAATCCATGGTTGAAACACCATCTAAGATAAGAGGTGTTACAACAACAGGACCCTTGGGGCTTACCAGGGTGGCGCGGTTTCTCAAAATGCAGGCCTCGGGCTGCTTCCTAATATTATTATCCTTGTTCATCCTATCACCATCTTATGCACTTTCTAGTGATGAAGTCTCTTTCATTGCTCGTCGCCAATTGTTACACCTTCACGAGAACGATGACTTACCCGATAGCTTTGTAGATAACTATAAGACAGATCTAACATTCCCACATCCTAGGCTCAAACGTGCATACATTGCACTTGAAGCATGGAAAAGAGCAATCTATTCAGACCCAACAAAGTTCACATCCAATTGGGTGGGTGCAGATGTTTGCTCTTACAATGGTGTTTTCTGTGCGCCTGCTCTTGACGACCCGAAGATCGAGGTTGTTGCTGGGATTGATCTTAACCATGCAGACATCGCTGGCTACATACCTCCTGAGTTTGGGTTTTGTGGGATTCTCCCAGAGAGCTTCTCCAAGATGAAGCTCTTGTATGAGCTTGATATTAGCAATAATCGCTTCGTTGGTCCATTCCCCGTACCCGTGCTGTCCATTCCTGACATCAAATACCTCGACCTCAGATTCAATGACTTTGAAGGGGAGTTGCCTTGGGAGCTTTTCAGCAAGACACTTGATGCAATCTTTTTGAACAACAACAGGTTCGTATCCACAATCCCAGAGAGTCTAGGGAAGTCTCCGGCCTCGGTAGTGGTTTTGGCCAACAACCATTTGCATGGATGCATTCCTGGAAGCATTGGCCAAATGGGGAAGACCTTGAACGAGTTTGTTGCAATCAACAACAACATCACTGGGTGCTTGCCTGCAGACATTGGAAGGCTTAGCCATGCTGAGGTGTTTGATGTTAGCCAGAACAACTTTGTTGGTGTGCTACCAAGGACCTTTAACGGGCTCAAGAAAGTAGAGGTGTTGTCCATTGCAGGCAACAAGCTCACAGGCTTTGTCCCACGCAGCATCTGTGGTTTGCCCAAGTTGGTCAACTTCACATTTTCTTATAACTATTTCAATGGCGAGGAAGAAGGATGTGTGCCACCTAGAAAGGACATTGTGTTGGATGATAAGAGCAACTGCATACCAGATAGGTCAAAACAGAAGGGACAAGGCGCTTGCAATGCTGTCATAAGCAAGCCTGTTGATTGCAGAAAGGCACAGTGTGGCCACCCTTCTACCCCATCTCAGCCTAATCCTCCAGCTAAGAAGTCAACACCATCGGCACCAAAACCAAAGCCAAAGCCAAAGCCAAAGCCTTCTCCTTCCAATCCTCCATCTAAGAAGCCAACACCACCCTCAGTACCAAAACCAAAGCCAACCCCTACTCCTTCAAATCCTCCAAAACCATCCGTACCGAAACCAAAACCACAACCAAAGCATACCCCTTCTCCTTCAAATCCTCCAAGTGGGAAACAAGCACCACCCGTTCCAAAACCATCACCAAAGCCTACCCCATCTCCCTCCAATCCTCCAAGTGAGAAGCCAACACCATCAGGACCAAAACCAAAGCCACAATCACCCAAAACACAGTCACCACCTGAGGATGATCCTCGTAATGAATCACCTGAAGAAAGAGAAAGGCCTCCACAATCTCCCCCACTTTCACCAATCCAACCTCCACCACCGCCACCTCCTGTCCAATCTCCTCCCCCACCAGTTTACTCTCCACCACCTCCAGTCCACTCTCCACCACCACCAGTCCACTCTCCACCACCTCCACCTGTTTATTCTCCACCACCACCTCCAATACACCACCCTCCTCCACCAGTTCACTCCCCACCACCACCTGCAGTTCAATCTCCGCCACCTCCGATGCATTCTCCTCCTCCACCAGTTCAATCCCCACCCCCACCACCACCTGTCCACTCTCCACCAGCACCAGTATACTCCCCTCCACCACCAGTCCATTCTCCACCACCACCGGTCTACTCTCCACCACCACCCGTCCATTCTCCTCCACCACCTGTTTCATCTCCTCCTCCTCCTGTTAATGCACCTCCACCAGAAGATGATACCATCATTCCTACTCACTTCGGCGCTTCATATGCTTCGCCTCCTCCACCCATCATTCCTGGCTACTAA	2211	0.4903	MFILLCLSDIPLSANLGEEATFCQNKPGESMVETPSKIRGVTTTGPLGLTRVARFLKMQASGCFLILLSLFILSPSYALSSDEVSFIARRQLLHLHENDDLPDSFVDNYKTDLTFPHPRLKRAYIALEAWKRAIYSDPTKFTSNWVGADVCSYNGVFCAPALDDPKIEVVAGIDLNHADIAGYIPPEFGFCGILPESFSKMKLLYELDISNNRFVGPFPVPVLSIPDIKYLDLRFNDFEGELPWELFSKTLDAIFLNNNRFVSTIPESLGKSPASVVVLANNHLHGCIPGSIGQMGKTLNEFVAINNNITGCLPADIGRLSHAEVFDVSQNNFVGVLPRTFNGLKKVEVLSIAGNKLTGFVPRSICGLPKLVNFTFSYNYFNGEEEGCVPPRKDIVLDDKSNCIPDRSKQKGQGACNAVISKPVDCRKAQCGHPSTPSQPNPPAKKSTPSAPKPKPKPKPKPSPSNPPSKKPTPPSVPKPKPTPTPSNPPKPSVPKPKPQPKHTPSPSNPPSGKQAPPVPKPSPKPTPSPSNPPSEKPTPSGPKPKPQSPKTQSPPEDDPRNESPEERERPPQSPPLSPIQPPPPPPPVQSPPPPVYSPPPPVHSPPPPVHSPPPPPVYSPPPPPIHHPPPPVHSPPPPAVQSPPPPMHSPPPPVQSPPPPPPVHSPPAPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVSSPPPPVNAPPPEDDTIIPTHFGASYASPPPPIIPGY*	737

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g2144	736	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	58	622	-	-
	Dod09g2144	736	SUPERFAMILY	L domain-like	126	392	-	-
	Dod09g2144	736	Pfam	Leucine rich repeat	324	379	IPR001611	GO:0005515
	Dod09g2144	736	MobiDBLite	consensus disorder prediction	556	570	-	-
	Dod09g2144	736	MobiDBLite	consensus disorder prediction	436	554	-	-
	Dod09g2144	736	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3	58	622	-	-
	Dod09g2144	736	Gene3D	Ribonuclease Inhibitor	123	398	IPR032675	-
	Dod09g2144	736	MobiDBLite	consensus disorder prediction	571	712	-	-
	Dod09g2144	736	MobiDBLite	consensus disorder prediction	428	736	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g2144	Dod-Chr9	42877781	42880238	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod09g2144	62	657	Trihelix Transcription Factor Family	AT3G19020	46.591	1.10e-155	474

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g2144	-		-	gmx:121175033	581.252

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