Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2144 ATGTTTATTTTGCTCTGCCTAAGCGACATCCCGTTAAGCGCAAATTTAGGTGAGGAAGCAACATTTTGCCAAAATAAACCAGGCGAATCCATGGTTGAAACACCATCTAAGATAAGAGGTGTTACAACAACAGGACCCTTGGGGCTTACCAGGGTGGCGCGGTTTCTCAAAATGCAGGCCTCGGGCTGCTTCCTAATATTATTATCCTTGTTCATCCTATCACCATCTTATGCACTTTCTAGTGATGAAGTCTCTTTCATTGCTCGTCGCCAATTGTTACACCTTCACGAGAACGATGACTTACCCGATAGCTTTGTAGATAACTATAAGACAGATCTAACATTCCCACATCCTAGGCTCAAACGTGCATACATTGCACTTGAAGCATGGAAAAGAGCAATCTATTCAGACCCAACAAAGTTCACATCCAATTGGGTGGGTGCAGATGTTTGCTCTTACAATGGTGTTTTCTGTGCGCCTGCTCTTGACGACCCGAAGATCGAGGTTGTTGCTGGGATTGATCTTAACCATGCAGACATCGCTGGCTACATACCTCCTGAGTTTGGGTTTTGTGGGATTCTCCCAGAGAGCTTCTCCAAGATGAAGCTCTTGTATGAGCTTGATATTAGCAATAATCGCTTCGTTGGTCCATTCCCCGTACCCGTGCTGTCCATTCCTGACATCAAATACCTCGACCTCAGATTCAATGACTTTGAAGGGGAGTTGCCTTGGGAGCTTTTCAGCAAGACACTTGATGCAATCTTTTTGAACAACAACAGGTTCGTATCCACAATCCCAGAGAGTCTAGGGAAGTCTCCGGCCTCGGTAGTGGTTTTGGCCAACAACCATTTGCATGGATGCATTCCTGGAAGCATTGGCCAAATGGGGAAGACCTTGAACGAGTTTGTTGCAATCAACAACAACATCACTGGGTGCTTGCCTGCAGACATTGGAAGGCTTAGCCATGCTGAGGTGTTTGATGTTAGCCAGAACAACTTTGTTGGTGTGCTACCAAGGACCTTTAACGGGCTCAAGAAAGTAGAGGTGTTGTCCATTGCAGGCAACAAGCTCACAGGCTTTGTCCCACGCAGCATCTGTGGTTTGCCCAAGTTGGTCAACTTCACATTTTCTTATAACTATTTCAATGGCGAGGAAGAAGGATGTGTGCCACCTAGAAAGGACATTGTGTTGGATGATAAGAGCAACTGCATACCAGATAGGTCAAAACAGAAGGGACAAGGCGCTTGCAATGCTGTCATAAGCAAGCCTGTTGATTGCAGAAAGGCACAGTGTGGCCACCCTTCTACCCCATCTCAGCCTAATCCTCCAGCTAAGAAGTCAACACCATCGGCACCAAAACCAAAGCCAAAGCCAAAGCCAAAGCCTTCTCCTTCCAATCCTCCATCTAAGAAGCCAACACCACCCTCAGTACCAAAACCAAAGCCAACCCCTACTCCTTCAAATCCTCCAAAACCATCCGTACCGAAACCAAAACCACAACCAAAGCATACCCCTTCTCCTTCAAATCCTCCAAGTGGGAAACAAGCACCACCCGTTCCAAAACCATCACCAAAGCCTACCCCATCTCCCTCCAATCCTCCAAGTGAGAAGCCAACACCATCAGGACCAAAACCAAAGCCACAATCACCCAAAACACAGTCACCACCTGAGGATGATCCTCGTAATGAATCACCTGAAGAAAGAGAAAGGCCTCCACAATCTCCCCCACTTTCACCAATCCAACCTCCACCACCGCCACCTCCTGTCCAATCTCCTCCCCCACCAGTTTACTCTCCACCACCTCCAGTCCACTCTCCACCACCACCAGTCCACTCTCCACCACCTCCACCTGTTTATTCTCCACCACCACCTCCAATACACCACCCTCCTCCACCAGTTCACTCCCCACCACCACCTGCAGTTCAATCTCCGCCACCTCCGATGCATTCTCCTCCTCCACCAGTTCAATCCCCACCCCCACCACCACCTGTCCACTCTCCACCAGCACCAGTATACTCCCCTCCACCACCAGTCCATTCTCCACCACCACCGGTCTACTCTCCACCACCACCCGTCCATTCTCCTCCACCACCTGTTTCATCTCCTCCTCCTCCTGTTAATGCACCTCCACCAGAAGATGATACCATCATTCCTACTCACTTCGGCGCTTCATATGCTTCGCCTCCTCCACCCATCATTCCTGGCTACTAA 2211 0.4903 MFILLCLSDIPLSANLGEEATFCQNKPGESMVETPSKIRGVTTTGPLGLTRVARFLKMQASGCFLILLSLFILSPSYALSSDEVSFIARRQLLHLHENDDLPDSFVDNYKTDLTFPHPRLKRAYIALEAWKRAIYSDPTKFTSNWVGADVCSYNGVFCAPALDDPKIEVVAGIDLNHADIAGYIPPEFGFCGILPESFSKMKLLYELDISNNRFVGPFPVPVLSIPDIKYLDLRFNDFEGELPWELFSKTLDAIFLNNNRFVSTIPESLGKSPASVVVLANNHLHGCIPGSIGQMGKTLNEFVAINNNITGCLPADIGRLSHAEVFDVSQNNFVGVLPRTFNGLKKVEVLSIAGNKLTGFVPRSICGLPKLVNFTFSYNYFNGEEEGCVPPRKDIVLDDKSNCIPDRSKQKGQGACNAVISKPVDCRKAQCGHPSTPSQPNPPAKKSTPSAPKPKPKPKPKPSPSNPPSKKPTPPSVPKPKPTPTPSNPPKPSVPKPKPQPKHTPSPSNPPSGKQAPPVPKPSPKPTPSPSNPPSEKPTPSGPKPKPQSPKTQSPPEDDPRNESPEERERPPQSPPLSPIQPPPPPPPVQSPPPPVYSPPPPVHSPPPPVHSPPPPPVYSPPPPPIHHPPPPVHSPPPPAVQSPPPPMHSPPPPVQSPPPPPPVHSPPAPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVSSPPPPVNAPPPEDDTIIPTHFGASYASPPPPIIPGY* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2144 736 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 58 622 - -
Dod09g2144 736 SUPERFAMILY L domain-like 126 392 - -
Dod09g2144 736 Pfam Leucine rich repeat 324 379 IPR001611 GO:0005515
Dod09g2144 736 MobiDBLite consensus disorder prediction 556 570 - -
Dod09g2144 736 MobiDBLite consensus disorder prediction 436 554 - -
Dod09g2144 736 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 58 622 - -
Dod09g2144 736 Gene3D Ribonuclease Inhibitor 123 398 IPR032675 -
Dod09g2144 736 MobiDBLite consensus disorder prediction 571 712 - -
Dod09g2144 736 MobiDBLite consensus disorder prediction 428 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2144 Dod-Chr9 42877781 42880238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2144 62 657 Trihelix Transcription Factor Family AT3G19020 46.591 1.10e-155 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2144 - - gmx:121175033 581.252