Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2114 ATGGCCGTATCAATTGGAAGAAGTTTCCCTTCTCAGCCATGCTCTTTATTCAACAGTGAGAGCATAGATAATAAACCTTTACAAGGAGGAAGATACTTGTGGTTGGGGACTGCTTCTGCAGGAGCACGAGTCACTACTAGTCCACGTAGTAGGCGAATTTGTGTTGCAGCGCAACAGCGACCTACATGGCTCCCAGGACTTGATCCCCCACCTTATCTTGATGGAACTCTGGCCGGAGATTTTGGGTTTGACCCTCTTGGACTTGCAGAAGATCCTGAGAGCTTAAAGTGGTATGTGCAGGCAGAGCTAGTCCATTCTCGCTTTGCCATGCTTGGGGTCTTGGGAATTCTAGTGACTGATGTACTTCGCGTTACGGGACTTAGTAAAATCCCAGTTTGGTTTGAAGCCGGTGCAGCGAAATACGACATTGCCAACACAGAGACACTTTTCATTGTTCAACTACTTTTGATGGGGTTTGCTGAAACAAAAAGGTACATGGATTACGTTACTCCTGGATCTCAAGCTAAAGAGGGGTCTTTCTTTGGATTGGAAGCTTCACTAGAAGGCTTAGAGCCAGGGTATCCCGGGGGTCCTCTGTTAAATCCTCTTGGCCTGGCTAAAGACATAAAAAACGCTCATGATTGGAAGCTTAAAGAGATCAAGAACGGGCGACTTGCAATGGTGGCAATGCTTGGGATCTTTGTGCAAGCTTCGGTGACTCATGTTGGACCAATTGATAATCTTGTGGAGCATCTCTCCAATCCATGGCATAAAACTATTATTCAGACCCTTGCCAGTTCTAGTTCTTAA 810 0.4605 MAVSIGRSFPSQPCSLFNSESIDNKPLQGGRYLWLGTASAGARVTTSPRSRRICVAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLAEDPESLKWYVQAELVHSRFAMLGVLGILVTDVLRVTGLSKIPVWFEAGAAKYDIANTETLFIVQLLLMGFAETKRYMDYVTPGSQAKEGSFFGLEASLEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2114 269 Pfam Chlorophyll A-B binding protein 69 237 IPR022796 -
Dod09g2114 269 SUPERFAMILY Chlorophyll a-b binding protein 54 266 - -
Dod09g2114 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 266 IPR001344 GO:0009765|GO:0016020
Dod09g2114 269 Gene3D Chlorophyll a/b binding protein domain 62 269 - -
Dod09g2114 269 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2114 Dod-Chr9 42626833 42628369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2114 50 264 Chloroplast and Mitochondria Gene Families AT3G61470 46.759 5.99e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2114 K08911 - gmx:100804934 411.764