Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2102 ATGGACAATATTGACCAGCTACAATCGTCACCGTCGGTGGAGGATCAAATGGACATGATGATGATGATGATGATGCAGCTCCCTGAATTCTCTGCACCTTACGGCGACGGTACCACCGTCCAGGGATTTCCACCGCCGGAGTTTCACGGCGGTTCTAACAGCAGCACACGCACGAGTACTATGCCGCTATCTGACTCAATTGATAACCCTCCTTCTACTATGCATTGGTCTTCATTATTCACTCATCAATTACCATCCAGTTCTTCCACCACAATCTCTTTCTCTAACAGCCCTTCCCCTAGACAAGTGCTTCAGCAACAAGAACATGCCCCATCAGCTTCTTTGTTTGCAAATTCAGGAAAGGAAAGCTGGCGAGGCACCACTGAGGGTGCAAGCCCTTACGGTGCGGTGAACTCATCAGAGAGGCGGAACTCGATGGCTGCCATGAGGGAGATGATATTCAGGATCGCGGCCTTGCAGCCAATACACATAGACCCTGAGTCAGTGAAGCCACCGAAGCGGAGGAACGTGAAGATCTCGAAGGATCCTCAGAGCGTGGCGGCTCGGCACCGCAGAGAAAGGATAAGCGAGAGGATAAGGATACTGCAGAGACTGGTCCCTGGAGGGACTAAGATGGACACTGCTTCCATGTTGGATGAAGCCATTCACTATGTCCAGTTTCTCAAGACACAGGTTCAGTCACTCGAACGTGCTGCCGCCAACAACACGGCAACAAGGCCACTTGCTGCTGCTGGTGCAGGTGCAGGGATAGGGTTCCCAGTTGCAATGTCTAGTAGTAGGAGTGCTACTGCCACCGCCACCCCTAATTATCTTTCTCTGCCCAAACCTTACCAAGCCCGAAATGTTGAGCATTATGGAGATGCATGA 888 0.5146 MDNIDQLQSSPSVEDQMDMMMMMMMQLPEFSAPYGDGTTVQGFPPPEFHGGSNSSTRTSTMPLSDSIDNPPSTMHWSSLFTHQLPSSSSTTISFSNSPSPRQVLQQQEHAPSASLFANSGKESWRGTTEGASPYGAVNSSERRNSMAAMREMIFRIAALQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVQFLKTQVQSLERAAANNTATRPLAAAGAGAGIGFPVAMSSSRSATATATPNYLSLPKPYQARNVEHYGDA* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2102 295 MobiDBLite consensus disorder prediction 48 64 - -
Dod09g2102 295 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Dod09g2102 295 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 3 273 - -
Dod09g2102 295 SMART finulus 185 234 IPR011598 GO:0046983
Dod09g2102 295 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 237 IPR036638 GO:0046983
Dod09g2102 295 MobiDBLite consensus disorder prediction 87 138 - -
Dod09g2102 295 Pfam Helix-loop-helix DNA-binding domain 188 228 IPR011598 GO:0046983
Dod09g2102 295 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 3 273 IPR045843 GO:0003700|GO:0006355
Dod09g2102 295 MobiDBLite consensus disorder prediction 44 64 - -
Dod09g2102 295 Gene3D - 178 247 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2102 Dod-Chr9 42544522 42545409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2102 145 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 81.982 1.88e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod09g2102 HLH 2.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2102 - - gmx:100815041 264.618