Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2096 ATGAGGCCAGGTGCTCCAATGCATAGCTTCTTCGTTCCAGTGGTTCAGCAGGATCAACAAGGACAGCGCCCAGGTGGGCGGCGAGGAACAGGTCCTGTGCAACGATCCCTGCAGCCGGTGCCGTTGATGCAGCAGCAGATGCTTCCAAGGGGACGTGGCTATCGTTGCCCATCTGGTAGCAACATGCAGGATGCTCCAATGCTCACAGTCAATTATGACATGGGACAGCCAATGCCCAGTCAGGCCTTGGCTACGGCTTTTATGCTTGGTGAAGCTTTATACCCACTTGTTGATAAGCTGGAACATGATGCAGCAGCAAAGGTTACAGGCATGCTTTTGGAGATGGACCAGCCTGAAGTATTGCATCTGATTGAGTCACAAGATGCTCTCAAGGCAAAAGTTGCCGAGGCCATGGATGTATTGAAAAATGTTGCTCAGCAGCAAGCCCCAGCCGATCAACTGGCTTCACTCTCACTGAATGACAATCTGGTGTCCTAG 498 0.5201 MRPGAPMHSFFVPVVQQDQQGQRPGGRRGTGPVQRSLQPVPLMQQQMLPRGRGYRCPSGSNMQDAPMLTVNYDMGQPMPSQALATAFMLGEALYPLVDKLEHDAAAKVTGMLLEMDQPEVLHLIESQDALKAKVAEAMDVLKNVAQQQAPADQLASLSLNDNLVS* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2096 165 Gene3D - 77 148 - -
Dod09g2096 165 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 69 146 IPR002004 GO:0003723
Dod09g2096 165 MobiDBLite consensus disorder prediction 17 36 - -
Dod09g2096 165 SUPERFAMILY PABC (PABP) domain 38 152 IPR036053 GO:0003723
Dod09g2096 165 PANTHER RNA BINDING PROTEIN 87 151 - -
Dod09g2096 165 PANTHER RNA BINDING PROTEIN 1 77 - -
Dod09g2096 165 SMART poly_2 78 144 IPR002004 GO:0003723
Dod09g2096 165 Pfam Poly-adenylate binding protein, unique domain 88 141 IPR002004 GO:0003723
Dod09g2096 165 PANTHER POLYADENYLATE-BINDING PROTEIN 87 151 - -
Dod09g2096 165 PANTHER POLYADENYLATE-BINDING PROTEIN 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2096 Dod-Chr9 42490683 42491868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2096 1 163 Eukaryotic Initiation Factors Gene Family AT2G23350 53.061 4.10e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2096 K13126 - gmx:100784442 223.402