Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g2096 | ATGAGGCCAGGTGCTCCAATGCATAGCTTCTTCGTTCCAGTGGTTCAGCAGGATCAACAAGGACAGCGCCCAGGTGGGCGGCGAGGAACAGGTCCTGTGCAACGATCCCTGCAGCCGGTGCCGTTGATGCAGCAGCAGATGCTTCCAAGGGGACGTGGCTATCGTTGCCCATCTGGTAGCAACATGCAGGATGCTCCAATGCTCACAGTCAATTATGACATGGGACAGCCAATGCCCAGTCAGGCCTTGGCTACGGCTTTTATGCTTGGTGAAGCTTTATACCCACTTGTTGATAAGCTGGAACATGATGCAGCAGCAAAGGTTACAGGCATGCTTTTGGAGATGGACCAGCCTGAAGTATTGCATCTGATTGAGTCACAAGATGCTCTCAAGGCAAAAGTTGCCGAGGCCATGGATGTATTGAAAAATGTTGCTCAGCAGCAAGCCCCAGCCGATCAACTGGCTTCACTCTCACTGAATGACAATCTGGTGTCCTAG | 498 | 0.5201 | MRPGAPMHSFFVPVVQQDQQGQRPGGRRGTGPVQRSLQPVPLMQQQMLPRGRGYRCPSGSNMQDAPMLTVNYDMGQPMPSQALATAFMLGEALYPLVDKLEHDAAAKVTGMLLEMDQPEVLHLIESQDALKAKVAEAMDVLKNVAQQQAPADQLASLSLNDNLVS* | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g2096 | 165 | Gene3D | - | 77 | 148 | - | - | |
Dod09g2096 | 165 | ProSiteProfiles | Poly(A)-binding protein C-terminal (PABC) domain profile. | 69 | 146 | IPR002004 | GO:0003723 | |
Dod09g2096 | 165 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
Dod09g2096 | 165 | SUPERFAMILY | PABC (PABP) domain | 38 | 152 | IPR036053 | GO:0003723 | |
Dod09g2096 | 165 | PANTHER | RNA BINDING PROTEIN | 87 | 151 | - | - | |
Dod09g2096 | 165 | PANTHER | RNA BINDING PROTEIN | 1 | 77 | - | - | |
Dod09g2096 | 165 | SMART | poly_2 | 78 | 144 | IPR002004 | GO:0003723 | |
Dod09g2096 | 165 | Pfam | Poly-adenylate binding protein, unique domain | 88 | 141 | IPR002004 | GO:0003723 | |
Dod09g2096 | 165 | PANTHER | POLYADENYLATE-BINDING PROTEIN | 87 | 151 | - | - | |
Dod09g2096 | 165 | PANTHER | POLYADENYLATE-BINDING PROTEIN | 1 | 77 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g2096 | Dod-Chr9 | 42490683 | 42491868 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod09g2096 | 1 | 163 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 53.061 | 4.10e-47 | 160 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod09g2096 | K13126 | - | gmx:100784442 | 223.402 |