Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2093 ATGGGAAGTATGAAGGTGCATCAGTTCGCACGTGGACTGTGGGAGCACGAACCCTCCCTCACGCTTGGGTGCAAGCGCTTACGCCCTCTTGCTCCCAAGCTTCCCAACACTACCACCGACACCAGCACTCCTTCTGTTCCACATGCTAATTTCGATCTCAAGAGCTTCATCAGACCTGAGAGTGGCCCCAGAAAACTCGTTTCCTCTGACGATGAAAAAAAAGATCCACCTTCACCCCAGGGCCAGGTGGAAACGCATATTCCAGGAGGGACGCGGTGGAATCCGACGCAAGAGCAGATAGGGATATTGGAGATGCTGTACAGAGGAGGGATGCGAACTCCAAATGCTCAACAGATAGAGCAGATCACAGCACAGCTCGGCAAGTACGGCAAAATAGAAGGGAAGAACGTCTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAGAAGCAGAAGCGCAACACTCTTGGCCTTCCTCATACCCCTCGCACACCCACCACCACCACCTTTCATCATAGTATACCAGCTTTGGACACAACAAGGGGGGGAGTAGTAGAAATAGAAAGAGATGAGGAAGATAGTCCGTACAAGAAGAAGTGTAGGAGATGGGCGTTTGAGTACTTGGAAGACCAAAGCAGGTCTTCTTCTACTTCGTGTAAAGAGGAGGAACACAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 717 0.5091 MGSMKVHQFARGLWEHEPSLTLGCKRLRPLAPKLPNTTTDTSTPSVPHANFDLKSFIRPESGPRKLVSSDDEKKDPPSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLPHTPRTPTTTTFHHSIPALDTTRGGVVEIERDEEDSPYKKKCRRWAFEYLEDQSRSSSTSCKEEEHRTLELFPLHPEGR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2093 238 MobiDBLite consensus disorder prediction 34 49 - -
Dod09g2093 238 Gene3D - 90 157 - -
Dod09g2093 238 SMART HOX_1 88 155 IPR001356 GO:0003677
Dod09g2093 238 MobiDBLite consensus disorder prediction 156 172 - -
Dod09g2093 238 ProSiteProfiles 'Homeobox' domain profile. 96 151 IPR001356 GO:0003677
Dod09g2093 238 CDD homeodomain 91 152 IPR001356 GO:0003677
Dod09g2093 238 MobiDBLite consensus disorder prediction 216 238 - -
Dod09g2093 238 SUPERFAMILY Homeodomain-like 90 155 IPR009057 -
Dod09g2093 238 MobiDBLite consensus disorder prediction 210 238 - -
Dod09g2093 238 Pfam Homeodomain 91 150 IPR001356 GO:0003677
Dod09g2093 238 MobiDBLite consensus disorder prediction 64 79 - -
Dod09g2093 238 MobiDBLite consensus disorder prediction 149 172 - -
Dod09g2093 238 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 238 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Dod09g2093 238 MobiDBLite consensus disorder prediction 31 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2093 Dod-Chr9 42461561 42463023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2093 4 175 Wox Gene Family AT1G46480 62.637 1.01e-65 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod09g2093 Homeodomain 5.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2093 - - gmx:100781015 369.007