Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2092 ATGGAAGAAGAAAGAGACTGTTGCTCCACCAATTCCACGGCCACCACCAGAAGCAGCAGGACAGGCAGAAGAAGAAGCGGAACCAACAGCAGCAGCAGCAGCAGCAATAGTAACAGTCCTTTATCGGAAAAGCGCAAGCAGCAGCAGCAACAGCAACAAGAGAAGCCGTACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCTGAGATTAGAGAACCCAACAAGAGGTCAAGGATATGGCTGGGTTCCTACACGACCCCTGTGGCCGCCGCACGCGCCTACGACACCGCCGTTTTCTGCCTGAGGGGCCCTTCGGCTCGGCTCAACTTCCCGGAGGAGTTGTTCCAAGACCAAAACGACAACCATCAATTAGGGGACATGTCCGCAGATTCCATACGGAAGAGGGCCACGCAAGTTGGCGCCAGAGTGGACGCCGCCGCTCTCCAGGCCTCGTCCCGCTCCGCTTCCAGCCAAATCACCTCCGATAAACCAGACCTGAACGAGTTCCCTCAACCTGATGAAGATTCCCTTGACCTTCAAGATTAG 552 0.5562 MEEERDCCSTNSTATTRSSRTGRRRSGTNSSSSSSNSNSPLSEKRKQQQQQQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFCLRGPSARLNFPEELFQDQNDNHQLGDMSADSIRKRATQVGARVDAAALQASSRSASSQITSDKPDLNEFPQPDEDSLDLQD* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2092 183 MobiDBLite consensus disorder prediction 8 56 - -
Dod09g2092 183 MobiDBLite consensus disorder prediction 149 183 - -
Dod09g2092 183 MobiDBLite consensus disorder prediction 151 167 - -
Dod09g2092 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 27 176 - -
Dod09g2092 183 SUPERFAMILY DNA-binding domain 56 114 IPR016177 GO:0003677
Dod09g2092 183 Pfam AP2 domain 57 105 IPR001471 GO:0003700|GO:0006355
Dod09g2092 183 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Dod09g2092 183 CDD AP2 57 114 IPR001471 GO:0003700|GO:0006355
Dod09g2092 183 MobiDBLite consensus disorder prediction 1 59 - -
Dod09g2092 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 27 176 - -
Dod09g2092 183 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Dod09g2092 183 PRINTS Ethylene responsive element binding protein signature 95 115 IPR001471 GO:0003700|GO:0006355
Dod09g2092 183 Gene3D AP2/ERF domain 56 115 IPR036955 GO:0003700|GO:0006355
Dod09g2092 183 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2092 Dod-Chr9 42430138 42431792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2092 50 175 AP2-EREBP Transcription Factor Family AT2G23340 53.846 5.89e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod09g2092 AP2 2.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2092 K09286 - cpap:110818891 191.815