Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2082 ATGCCGAATGTTAGACAGTTACAGTTGCTGCTACTGTACGTGTTGTGGAATGCATGTCTCTCAGCACCACCATCACTCTGTTCCAAACTCCCCCCTTCCACCAGCAGCAGGCCCATCATCTTACCACCCGACGCCGCCGCCCTCACGGCATTCAAATCCAAAGCCGATCCCAACAACCGCCTCAACTTCTCTGCCACCACCGCTCTCCGCTTCTGCGCATGGGAAGGTGTCCAATGCGCCGGAAACAGAGCAGTGCGTCTCGTCCTCCAGCACTTGGATCTCGGAGGCGTCTTCGCTCCAAATACGCTCTCAAAGCTCGACCAGCTCCGAGTCCTCAGCTTGCACAACAACTCCCTCACCGGACCCATCCCTGACCTCACCGGCCTCTTCAACCTCAAGAGCCTCTTCCTCCACAACAACCACTTCACCGGTTCTCTCCCTCCTTCACTCTTCTCCCTCCACAGGCTCCGAACCTTGGATTTCTCTCGCAACAACCTCTCTGGTTCCATTCCAACCGGCTTCACCAAGCTAAAGCGTCTCTACTCCCTCCGTTTGAGTTGGAACACCTTCAACGGCACCGTTCCTCCTTTGAACCAGTCTTCTCTCCGAACCTTCGATGTCTCCGGCAACAACCTCACCGGCGCCATTCCTGTCACGCCTGCATTGTTCCGTTTTGATTCTTTCTCCTTCGCTTTCAACCCCGGACTCTGCGGCGAGATCATCCACAAAGAATGCCACCCGAGTGCACCGTTCTTCGGGCCGGTGACTTCCTCGGCCTTGTCGCCGCCGCCGGCTGTGGTCGTCGGCCAGAGTGCGGAGGTTCACGGCGTTAGCGGACTAATCCGGCAGCCGTACCAGAAAAGGTACGACCGGACGGCGGTCATAATCGGATTCTCGATGGGAGTGTTTGTTCTCGTGGTTTCCTTGGTGTGCTTCGCGGTGGCCGTGAAGAGACAGAGGAGGAGGAGGAGCAGAAGCAAGAAGGACGGTTCGGGTTCGGGTTACATGGGGTCGGATGCGGCGGCGACGGCAGAGGCAGCGGCGGCGATGCAGGTGGAGCAGGAGAGGGAGCTGGAGGAGAAGGTGAAGAGGGCGCAGGTGGTGGCGAAGAGTGGGAGCTTGGTATTCTGTGCGGGTGAGGCGCAGGTGTACACGCTGGACCAGCTGATGAAGGGCTCTGCTGAGCTCTTGGGGAGAGGGTGTTTGGGGACGACGTACAAGGCGGTGCTCGATAACCGTCTGATCGTGACGGTTAAGAGGCTTGATGCTGGGAAGATGGCTGCGCATGCAACGAAGGAGGTTTTCGAGCGCCACATGGAATCAGTGGGTGGGCTTCGGCATCCAAATTTGGTTCCAGTTAGGGCTTATTTTCAGGCCAAGGATGAAAGGCTCATTATCTATGACTACCAGCCCAATGGCAGCCTCTTCTCCCTCATTCACGGTTCTAGATCAAGCAGGGCAAGGCCATTACACTGGACATCGTGCTTGAAAATAGCAGAGGACGTAGCACAAGGGCTGTCCTACATTCACCAGGCATGGAGACTGGTCCACGGAAATCTCAAGTCCTCGAATGTCCTGCTTGGACCTGATTTCGAGGCATGCATCACAGACTACTGCCTCACCGTGTTGGCCAACCACTCAAGCTTCCATGAAGATGCTGATTCTGCAGCGTACAGGGCCCCAGAGACCCGCAATCCAAAGCACCAGCCAACAACCAGATCGGACGTTTATTCATATGGGATTCTGTTGTTGGAGCTTCTGTCTGGGAAATCTCCTTCTGAGGTGCCATTCTTGGTTCCCAGTGATATGTTGGGTTGGGTGAGGTCCATCAGGGATGACAATGGGGGTGAAGATAGCAGAATGGACATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGACCTCGCCCGAGCAGAGACCCACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGAGATTGTATTATTGGAGAATAGTGAATTGGACTCGCGGCAGTAG 2004 0.5549 MPNVRQLQLLLLYVLWNACLSAPPSLCSKLPPSTSSRPIILPPDAAALTAFKSKADPNNRLNFSATTALRFCAWEGVQCAGNRAVRLVLQHLDLGGVFAPNTLSKLDQLRVLSLHNNSLTGPIPDLTGLFNLKSLFLHNNHFTGSLPPSLFSLHRLRTLDFSRNNLSGSIPTGFTKLKRLYSLRLSWNTFNGTVPPLNQSSLRTFDVSGNNLTGAIPVTPALFRFDSFSFAFNPGLCGEIIHKECHPSAPFFGPVTSSALSPPPAVVVGQSAEVHGVSGLIRQPYQKRYDRTAVIIGFSMGVFVLVVSLVCFAVAVKRQRRRRSRSKKDGSGSGYMGSDAAATAEAAAAMQVEQERELEEKVKRAQVVAKSGSLVFCAGEAQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDAGKMAAHATKEVFERHMESVGGLRHPNLVPVRAYFQAKDERLIIYDYQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLTVLANHSSFHEDADSAAYRAPETRNPKHQPTTRSDVYSYGILLLELLSGKSPSEVPFLVPSDMLGWVRSIRDDNGGEDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLENSELDSRQ* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2082 667 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515
Dod09g2082 667 SUPERFAMILY Protein kinase-like (PK-like) 395 650 IPR011009 -
Dod09g2082 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 29 661 - -
Dod09g2082 667 Pfam Leucine rich repeat 131 188 IPR001611 GO:0005515
Dod09g2082 667 ProSiteProfiles Protein kinase domain profile. 391 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2082 667 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 29 661 - -
Dod09g2082 667 Pfam Protein kinase domain 395 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2082 667 Gene3D Phosphorylase Kinase; domain 1 358 469 - -
Dod09g2082 667 Gene3D Ribonuclease Inhibitor 43 198 IPR032675 -
Dod09g2082 667 SUPERFAMILY L domain-like 51 237 - -
Dod09g2082 667 Gene3D Transferase(Phosphotransferase) domain 1 471 663 - -
Dod09g2082 667 Gene3D Ribonuclease Inhibitor 199 246 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2082 Dod-Chr9 42357408 42361422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2082 44 663 Receptor kinase-like Gene Family AT5G43020 60.348 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod09g2082 Pkinase 3.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2082 - - gmx:100817172 964.526