Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2066 ATGGAGACTCGCGCCGCCGCGAAGAGGAGGGCAATGGCCGCCAACCTTGCTGAGAACCAACCCCCTAAAAGGAAACGGGTTGTCTTGGGTGAGCTTCCCAATGCACCTAATGTGAATGTTACTGTCCCTGAAACTCTGAATCCCCAGAAGAAACCCAAATGCCGAAACAATCCTATGCCCAAGAAAGCTGTTGCGGCCACCAACAACACCGCTGTTGCAGAGGTTAAGGTGGAAATAGAGCCTGACAATGCCGTTGTTCCCAAACCATCCACACTTGACAAGTTCCATGATCCACTCGCTAGGGACCCTTATGTTTCCGACATCTACATGTATCTTCGCTCAATGGAGATGGAGAGAAAGAGAAGACCGAGGGTTGACTATCTGGAGAGGGTTCAGAAAGATGTTACTTCGAACATGAGGGGGATATTGGTGGATTGGTTAGTGGAGGTTGCGGAAGAGTACAAGCTTCTCCCGGATACTCTCTACCTTTCCATTTCTTACATCGATAGGTTCCTTTCTATGAATCGCGTCACTAAGCCCTATCTTCAGTTGCTCGGTGTTTCCTCCATGCTCATTGCATCCAAGTATGAAGAAATTAGCCCTCCACATGTGGAAGAGTTTTGCCTCATTACTGACAACACATACAAGAAGTTTGAGGTCGTGGAGATGGAAGCTGACATACTTAAGTCCTTAAACTTTGAACTGGGCAGCCCTACTATTAGGACCTTCTTAAGGCAAGAACTCACTCTGCTCATGACTTCGTTATTCTATTGTTGGAAAAATTTGCAGTTTGAGTTTCTGTGTTACTATCTTGCTGAGCTAAGTTTGTTGGAATACGGTTGTTTGAAGTTTTTGCCTTCTTTGGTGGCTGCTTCCGCTGTGTTTCTTGCTAGATTTATCATCTGGCCTAAACAGGATCCCTGGACTTCAACCCTTCATGAATGCTCTAAGTATACAGCAATTGGGTTGAAAGAATGTGTTCTGATCTTACATGACTTGTATTTGGGAAGAAGGGGAGCATGTTTCCAAGCTATTCGGGACAAATACAAGCAACACAGGGTGACCATCCTCACCTTTTATTTGGTTGCATTTCTTTCCACTTTTATTATGTCAAGTGGAATGACTTTGTGTTTTTTGTACTGTAACAGTTCAAATACGTGGCAAATCTGCCTTGCTCTCCACAGGTACCGGATTGCTGCTTTGAAGAAGAGTAATGTATTTGGATTGAACTTGCTATATTTTGCACAAGAAGCATGCCATATGGGTGAGGGACAGAAATGA 1281 0.445 METRAAAKRRAMAANLAENQPPKRKRVVLGELPNAPNVNVTVPETLNPQKKPKCRNNPMPKKAVAATNNTAVAEVKVEIEPDNAVVPKPSTLDKFHDPLARDPYVSDIYMYLRSMEMERKRRPRVDYLERVQKDVTSNMRGILVDWLVEVAEEYKLLPDTLYLSISYIDRFLSMNRVTKPYLQLLGVSSMLIASKYEEISPPHVEEFCLITDNTYKKFEVVEMEADILKSLNFELGSPTIRTFLRQELTLLMTSLFYCWKNLQFEFLCYYLAELSLLEYGCLKFLPSLVAASAVFLARFIIWPKQDPWTSTLHECSKYTAIGLKECVLILHDLYLGRRGACFQAIRDKYKQHRVTILTFYLVAFLSTFIMSSGMTLCFLYCNSSNTWQICLALHRYRIAALKKSNVFGLNLLYFAQEACHMGEGQK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2066 426 CDD CYCLIN 139 228 IPR013763 -
Dod09g2066 426 Pfam Cyclin, N-terminal domain 107 235 IPR006671 -
Dod09g2066 426 Gene3D - 107 354 - -
Dod09g2066 426 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Dod09g2066 426 SMART cyclin_7 242 332 IPR013763 -
Dod09g2066 426 SMART cyclin_7 145 229 IPR013763 -
Dod09g2066 426 Gene3D - 123 236 - -
Dod09g2066 426 SUPERFAMILY Cyclin-like 96 235 IPR036915 -
Dod09g2066 426 PANTHER CYCLIN-A3-1-RELATED 19 359 - -
Dod09g2066 426 CDD CYCLIN 265 331 IPR013763 -
Dod09g2066 426 Pfam Cyclin, C-terminal domain 260 354 IPR004367 -
Dod09g2066 426 PANTHER CYCLINS 19 359 IPR039361 -
Dod09g2066 426 SMART Cyclin_C_2 238 360 IPR004367 -
Dod09g2066 426 SUPERFAMILY Cyclin-like 243 354 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2066 Dod-Chr9 42155160 42157074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2066 3 353 Core Cell Cycle Gene Families AT1G47210 55.085 1.34e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2066 K06627 - cpap:110818790 394.045