Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2065 ATGGAGAGCTACCTGAATGAGAATTTCGGGGAGGTGAAACCGAAGAACCCATCGGAAGAAGCGCTTCAGAGATGGAGGAAGCTGTGCTGGCTTGTCAAGAACCGCAAGAGGAGGGCAATGGCCGCCAACCTTGCTGAGAACCAACCCCCCAAAACGAAACGGGTTGTCTTGGGTGAGCTTCCGAATGTACCCAATGTAAATGTTACGGTCCCTGAAGCTCTGAATCCCCAGAAGAAACCCACATGCCGAAGCAATCCCAAGCCCAAGAAAGCTGCTGCGGCCACCAACAACACCGCTCTTGCAGAGGTCAATGTGGAAATAGAGCTTGACAATGCCGTTGTTCCCAAACCATCCACACTTGACAAGTTCCGTGATCCACTCCCCAGGGAACCTTATGTTTCCGACATCTACATGTATCTTCGCTCAATGGAGATGGAGAGAAAGAGAAGACCGAGGGTTGACTATCTGGAGAGGGTTCAGAAAGATGTTACTGCGAACATGAGAGGGATGTTGGTGGATTGGTTAGTGGAGGTTGCCGAGGAGTACAAGCTTCTCCCCGACACTCTCTACCTTTCCATTTCTTACATCGATAGGTACCTTTCTATGAATCGCGTCACTGAGCCCTATCTTCAGTTGCTCGGTGTTTCCTCCATGCTCACTGCATCCAAGTATGAAGAAATTAGCCCTCCACATGTGGAAGAGTTCTGCCTCATTACTGACAACACATACAAGAAGATTGAGGTATGTTTACTGATTGTTGTTTTTCATTATTATATTTGCATTCAGTCTCAGAAGTTGCAGTTTGAGTTTGTGTGTTATTATCTTGCTGAGCTAAGTTTGTTGGAATACGGTTGTTTGAAGTTTTTGCCTTCTTTGGTGGCTGCTTCTGCAGTGTTTCTTGCTAGATTTATCATCTGGCATAAACAGGATCCCTGGACTTCAACCCTTCATGAATGCTCTAAGTATACAGCAATTGGGTTGAAAGAATGTGTTCTGATCTTACATGACTTGTATTTGGGAAGAAGGGGAGCATGTTTCCAAGCTATTCGGGACAAATACAAGCAACACAGGTTCAAATATGTGGCCAATCTGCCTTGCTCTCCACAGATACCGGATTGCTGCTTTGAAGAAGAGTAA 1137 0.46 MESYLNENFGEVKPKNPSEEALQRWRKLCWLVKNRKRRAMAANLAENQPPKTKRVVLGELPNVPNVNVTVPEALNPQKKPTCRSNPKPKKAAAATNNTALAEVNVEIELDNAVVPKPSTLDKFRDPLPREPYVSDIYMYLRSMEMERKRRPRVDYLERVQKDVTANMRGMLVDWLVEVAEEYKLLPDTLYLSISYIDRYLSMNRVTEPYLQLLGVSSMLTASKYEEISPPHVEEFCLITDNTYKKIEVCLLIVVFHYYICIQSQKLQFEFVCYYLAELSLLEYGCLKFLPSLVAASAVFLARFIIWHKQDPWTSTLHECSKYTAIGLKECVLILHDLYLGRRGACFQAIRDKYKQHRFKYVANLPCSPQIPDCCFEEE* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2065 378 PANTHER CYCLINS 264 377 IPR039361 -
Dod09g2065 378 PANTHER CYCLINS 46 249 IPR039361 -
Dod09g2065 378 Gene3D - 17 55 - -
Dod09g2065 378 Gene3D - 152 248 - -
Dod09g2065 378 SUPERFAMILY Cyclin-like 124 249 IPR036915 -
Dod09g2065 378 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 38 IPR024750 GO:0005516
Dod09g2065 378 Pfam Cyclin, C-terminal domain 263 366 IPR004367 -
Dod09g2065 378 SMART Cyclin_C_2 249 367 IPR004367 -
Dod09g2065 378 CDD CYCLIN 269 335 IPR013763 -
Dod09g2065 378 Gene3D - 250 372 - -
Dod09g2065 378 SUPERFAMILY Cyclin-like 257 368 IPR036915 -
Dod09g2065 378 CDD CYCLIN 167 254 IPR013763 -
Dod09g2065 378 Pfam Cyclin, N-terminal domain 135 248 IPR006671 -
Dod09g2065 378 ProSitePatterns Cyclins signature. 168 199 IPR006671 -
Dod09g2065 378 SMART cyclin_7 173 255 IPR013763 -
Dod09g2065 378 SMART cyclin_7 257 336 IPR013763 -
Dod09g2065 378 PANTHER CYCLIN-A3-1-RELATED 264 377 - -
Dod09g2065 378 PANTHER CYCLIN-A3-1-RELATED 46 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2065 Dod-Chr9 42149598 42151524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2065 36 377 Core Cell Cycle Gene Families AT5G43080 47.354 3.54e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2065 K06627 - cpap:110818790 339.347