Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2062 ATGAATGATGTTCAGTCGCGAGAAGATGAGTCGAAAGAGGACGACATCGACAGGGACGAAGAGGCGAACCGCCTGCTACAATCAACGTCATCGGGAGACGAGGAGGAGGAGGTAGCGTACGAGGGTGGGGAGAAGATCCAGGTCGTAGATTTCGACTTGGGGGACGGTGACGATGACTCGAGCGTGCCCCCTCCGTTCTCGTGGAAGAAGCTGTGGCTGTTCACTGGGCCAGGGTTCTTGATGAGCATAGCGTTTCTGGATCCGGGGAATCTGGAAGGGGATCTCCAGGCTGGGGCCATCGCCGGTTACTCCCTGCTGTGGCTGCTCATGTGGGCCACGTTTATGGGCCTGCTGATCCAGCTCCTGTCCGCGAGGGTTGGGGTGGCCACTGGGCGCCACCTCGCTGAGCTGTGCAGGGACGAGTATCCGAATTGGGCCAGGCTTGTGCTGTGGTTCATGGCCGAGATGGCCCTCATTGGCGCCGACATTCAAGAGGTCATTGGCAGTGCCATTGCCATCCAAATTCTTAGCCGTGGCCTCCTCCCCCTCTGGGTTGGTGTTTTGATTACTGCTTCCGATTGTTTTGTCTTTCTGTTTCTTGAGAATTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATTGCTACTATGGCTCTTTCTTTTGCCTGGATGTTCTTCGACACGAAACCTAGTGGAAAAGAGCTTTTGATGGGTATATTGCTTCCAAGACTTAGCTCGAAAACAATTCGTCAGGCTGTGGGTGTTGTTGGTTGTGTCATAATGCCTCACAATGTATTCCTGCATTCCGCTTTAGTGCAGTCAAGGAAGATTGATCCCAAAAAGAAAGGCCAGGTACAGGAGGCTCTCAACTACTACACAATCGAGTCATCAGCTGCACTTTCAATCTCCTTCATGATCAATCTATTTGTCACAACGGTTTTTGCCAAGGGGTTTTTTGGGACAAAACAGGCAGATAGCATAGGATTGGTGAATGCAGGGCAGTATCTTGAGGAAAAGTATGGAGGAGGAGTCTTCCCCATTCTTTATATATGGGGAATTGGGTTATTGGCCGCTGGACAGAGTAGCACCATAACTGGCACTTATGCTGGCCAATTCATAATGGGCGGTTTCCTCAACCTTCGTTTAAAGAAATGGTTGAGAGCATTGATCACCCGTAGTTTTGCAATTGTGCCAACTATAGTTGTAGCTATTGTTTTCAATAGATCGGAGGCCTCATTGGATGTCTTGAATGAATGGCTTAATGTGCTTCAGTCCATTCAAATTCCCTTTGCACTGATTCCCCTCCTCACCTTGGTCTCCAAAGAGGAGATCATGGGGTCCTTTAGGGTTGGGCCTGCTCTTGAGAGGGTGGCGTGGAGTATTGCAGCACTGATAATAGTAATTAATGGATATCTCTTATTAGATTTCTTCGTGTCTGAGGTGAACGGTCTGCTGCTTGGTTTTGTAGTTTGCTTCGGCACAGCTGCCTATGTTGCATTCATTGTATATTTGGTTTCACAGAGTGGTGCCCTTTCTTCCACTTGGGTTAATCGACTTCCCAAGGGCTTTTCTTTAACTGCAAATTGA 1593 0.4903 MNDVQSREDESKEDDIDRDEEANRLLQSTSSGDEEEEVAYEGGEKIQVVDFDLGDGDDDSSVPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARLVLWFMAEMALIGADIQEVIGSAIAIQILSRGLLPLWVGVLITASDCFVFLFLENYGVRKLEAAFAVLIATMALSFAWMFFDTKPSGKELLMGILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPKKKGQVQEALNYYTIESSAALSISFMINLFVTTVFAKGFFGTKQADSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIVVAIVFNRSEASLDVLNEWLNVLQSIQIPFALIPLLTLVSKEEIMGSFRVGPALERVAWSIAALIIVINGYLLLDFFVSEVNGLLLGFVVCFGTAAYVAFIVYLVSQSGALSSTWVNRLPKGFSLTAN* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2062 530 MobiDBLite consensus disorder prediction 1 24 - -
Dod09g2062 530 MobiDBLite consensus disorder prediction 1 40 - -
Dod09g2062 530 PANTHER BNAC08G04640D PROTEIN 26 519 - -
Dod09g2062 530 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 26 519 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 PRINTS Natural resistance-associated macrophage protein signature 389 406 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 PRINTS Natural resistance-associated macrophage protein signature 150 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 PRINTS Natural resistance-associated macrophage protein signature 254 277 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 PRINTS Natural resistance-associated macrophage protein signature 423 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 69 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 Hamap Divalent metal cation transporter MntH [mntH]. 56 479 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g2062 530 Pfam Natural resistance-associated macrophage protein 92 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2062 Dod-Chr9 42130237 42134674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2062 2 510 Inorganic Solute Cotransporters AT1G47240 80.157 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2062 K21398 - gmx:100795013 878.626