Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2054 ATGAGCTGCAGTGGTTGCCGAGTCCTCCGCAAGGGTTGCAGCGATACCTGCGCACTCCGGTCATGCCTCCAGTGGATCCCTTCCCCTCAGGCACAGGGCTACGCCACTCTCTTCCTCGCTAAGTTCTTCGGCCGTAGCGACCTCATCTCCTTCATTTCCTCCGTCCCCCTCAACAACAGACCCGCACTGTTTCAGTCTCTGCTGTTTGAAGCGTGCGGGCGAACAATCAATCCCGTCAACGGTGCCGTCGGACTGCTGTCGACTGGCAACTGGCACGTGTGCCAGGCCGCCGTCGACACCGTACTCGCCGGCGGAGCTCTTCGGCCTTTGCCGGAGGTCATGCCGACGCCCGTCATAGACGAGTCTTCTTCGCACACCTCCATGCTCTCTCAATTGCGGCCGTTGCCAATGCCATCATCGGATCCGCCGCCAGTTCCAGTCCCACAGTTACATGTAAGCTTGGAGGCGTCGAAGAGGCGTACTGGTGATTCAACACCAGCAGCAATGTCATTGGTTTCTGGAGGGTCGGAGATAATGACGAGCTATGACTTTTGCAGCCACAATCAGAAGAAGCTATTGAATCTGTTCGTGTGA 594 0.5741 MSCSGCRVLRKGCSDTCALRSCLQWIPSPQAQGYATLFLAKFFGRSDLISFISSVPLNNRPALFQSLLFEACGRTINPVNGAVGLLSTGNWHVCQAAVDTVLAGGALRPLPEVMPTPVIDESSSHTSMLSQLRPLPMPSSDPPPVPVPQLHVSLEASKRRTGDSTPAAMSLVSGGSEIMTSYDFCSHNQKKLLNLFV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2054 197 Coils Coil 193 197 - -
Dod09g2054 197 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Dod09g2054 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 197 - -
Dod09g2054 197 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Dod09g2054 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2054 Dod-Chr9 42044654 42045329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2054 1 133 AS2 family AT3G49940 64.539 1.18e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod09g2054 LOB 1.4e-22 No_clan