Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g2054 | ATGAGCTGCAGTGGTTGCCGAGTCCTCCGCAAGGGTTGCAGCGATACCTGCGCACTCCGGTCATGCCTCCAGTGGATCCCTTCCCCTCAGGCACAGGGCTACGCCACTCTCTTCCTCGCTAAGTTCTTCGGCCGTAGCGACCTCATCTCCTTCATTTCCTCCGTCCCCCTCAACAACAGACCCGCACTGTTTCAGTCTCTGCTGTTTGAAGCGTGCGGGCGAACAATCAATCCCGTCAACGGTGCCGTCGGACTGCTGTCGACTGGCAACTGGCACGTGTGCCAGGCCGCCGTCGACACCGTACTCGCCGGCGGAGCTCTTCGGCCTTTGCCGGAGGTCATGCCGACGCCCGTCATAGACGAGTCTTCTTCGCACACCTCCATGCTCTCTCAATTGCGGCCGTTGCCAATGCCATCATCGGATCCGCCGCCAGTTCCAGTCCCACAGTTACATGTAAGCTTGGAGGCGTCGAAGAGGCGTACTGGTGATTCAACACCAGCAGCAATGTCATTGGTTTCTGGAGGGTCGGAGATAATGACGAGCTATGACTTTTGCAGCCACAATCAGAAGAAGCTATTGAATCTGTTCGTGTGA | 594 | 0.5741 | MSCSGCRVLRKGCSDTCALRSCLQWIPSPQAQGYATLFLAKFFGRSDLISFISSVPLNNRPALFQSLLFEACGRTINPVNGAVGLLSTGNWHVCQAAVDTVLAGGALRPLPEVMPTPVIDESSSHTSMLSQLRPLPMPSSDPPPVPVPQLHVSLEASKRRTGDSTPAAMSLVSGGSEIMTSYDFCSHNQKKLLNLFV* | 198 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g2054 | 197 | Coils | Coil | 193 | 197 | - | - | |
Dod09g2054 | 197 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Dod09g2054 | 197 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN | 1 | 197 | - | - | |
Dod09g2054 | 197 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 101 | IPR004883 | - | |
Dod09g2054 | 197 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 197 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g2054 | Dod-Chr9 | 42044654 | 42045329 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod09g2054 | 1 | 133 | AS2 family | AT3G49940 | 64.539 | 1.18e-62 | 192 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Dod09g2054 | LOB | 1.4e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod09g2054 | - | - | adu:107461241 | 241.506 |