Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2016 ATGGATCTTGGGACGGTGGGTTTGGATGGGTTGGTGGGTTCAGAAGCTTGTAGTTTTGTTTCTCATGCTTCAGATCCTGAGACAAAGCACAAGTGGTACGGATCTGGGTTCCTGAAGCAGGAGAGATCTGGCAACATTAATGAAGATGAGTGGAGGAACCCCAAAGTGGCCAAGACTGATGACAAGGCAATGTTCTCCCAGCAAAAGAACTCCTTCCTGAGATCTAATAATGCCATTCTCTTCTCTGATGGCCACCAGCAAATGCTGAGCTTCTCTTCTCCAAAATCAGACACTTTCTTAGTTGACAAGTCCTCCCCAAATGCCACATTTCCATATCCTTACCTCCCCTTATCTAGTTGCAACAGAAGTACAGGTTATAGTTCGGGAAGCATGCATGGGATATTAGCTGGGACAAGAGGGCCATTCACTCCATCTCAGTGGATGGAGCTTGAACATCAGGCCCTGATCTACAAGTACATAACAGCAAATGTGCCCGTACCCTCTCATCTCCTCGTCCCCATCAAGAAAGCGCTTGACTCGGCTGGCTTCTGTAACTTCTCAACCGTTTTAAGACCCAACCCAATGGTATGGGGAGGTTTCCATCTGGGGTTCTCGAACAACACCGATCCAGAGCCCGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTTGTGGACCAGAAGTATTGCGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCATTCAGGCCATGCCCTTACCGGGACCACCACCACCACCACTACTAACGCAAATTCCACCACCGGTTCAAAGCTGATTATGCCTAATGTCAGTGGTTCCTCCGTAGTGGTGCCTGGAGGCACTGCATCCAGCAGCCTCACCTTTGCACAACAACAGGAACCCAAGAATATGCACCCTCTTGCATCTGATACCTCTGCTGCGCCTAATAACATTAACAGGATGTTCATGACTAAGAAGGAGAATGGCAGTGAGAGAATCCCGAACACTGATGCCCTTCCAATGCTGCCTCCCACTCTTGAGCTGAAACCCAAGGAGAACAGCCCTTTTATGATTCATAAACAGCAAATCCCATATGAAGAATCTTCGAGGAACGAGTTTGGCCTTGTCACTTCTGATTCCCTCCTCAACCCTTCTCAGAAGAGCTCCACCATAGTCAGCAGCAGTAGCAGAAGCTTTGGTTCATTGACGAACCAAGAAACTGATTCCCAACATTCCCTTAGGCATTTCATTGATGACTGGCCCAAACTTGACATGCAATCAGAGAGGACCGAGCTATCGATTTCCATCCCAATGACTGCGTCCACAGACTTCATGTCATCCACTTCGTCTCCCACCAATGACAAGGTCACTCTGTCACCTCTAAGGCTATCGAGGGAGTTAGACCCAATTCAGATGGGTTTGGGTGTGGGAAATGCTCTAAATGACTCAAACACTAGGCAGGCTAATTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGCAGAGGTTCTGAATCTTAGCAATAACAATACTACAACAAGTGATCAATGTGCCAAGAACAACTCCTCTGCTCTCAACCTCATGACTGATGGTTGGGACAATAGCCCTCCACTAGGGTCCTCTCCCACTGGGGTTTTGCAAAAGACAGCGTTTGGATCCCTATCCAACAGCAGTGCTGGGAGCAGTCCAAGGGCAGAGAATAAGACACAAGAAGGAGCCAGCTTGTGCAATGACCTCCTAAGCTCAACTCTTGGGAATTCTTCCTCCTTGCCTGCCTTGTAG 1809 0.4887 MDLGTVGLDGLVGSEACSFVSHASDPETKHKWYGSGFLKQERSGNINEDEWRNPKVAKTDDKAMFSQQKNSFLRSNNAILFSDGHQQMLSFSSPKSDTFLVDKSSPNATFPYPYLPLSSCNRSTGYSSGSMHGILAGTRGPFTPSQWMELEHQALIYKYITANVPVPSHLLVPIKKALDSAGFCNFSTVLRPNPMVWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGHSGHALTGTTTTTTTNANSTTGSKLIMPNVSGSSVVVPGGTASSSLTFAQQQEPKNMHPLASDTSAAPNNINRMFMTKKENGSERIPNTDALPMLPPTLELKPKENSPFMIHKQQIPYEESSRNEFGLVTSDSLLNPSQKSSTIVSSSSRSFGSLTNQETDSQHSLRHFIDDWPKLDMQSERTELSISIPMTASTDFMSSTSSPTNDKVTLSPLRLSRELDPIQMGLGVGNALNDSNTRQANWIPITWESSMGGPLAEVLNLSNNNTTTSDQCAKNNSSALNLMTDGWDNSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRAENKTQEGASLCNDLLSSTLGNSSSLPAL* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2016 602 MobiDBLite consensus disorder prediction 242 282 - -
Dod09g2016 602 Pfam WRC 210 252 IPR014977 -
Dod09g2016 602 MobiDBLite consensus disorder prediction 390 412 - -
Dod09g2016 602 MobiDBLite consensus disorder prediction 537 582 - -
Dod09g2016 602 PANTHER GROWTH-REGULATING FACTOR 9 24 581 - -
Dod09g2016 602 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod09g2016 602 PANTHER - 24 581 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod09g2016 602 ProSiteProfiles WRC domain profile. 209 253 IPR014977 -
Dod09g2016 602 Pfam QLQ 141 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod09g2016 602 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod09g2016 602 MobiDBLite consensus disorder prediction 257 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2016 Dod-Chr9 41707357 41711244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2016 34 561 GRF Transcription Factor Family AT2G22840 42.495 3.79e-105 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod09g2016 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2016 - - aprc:113865097 802.742