Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1983 ATGGCTAGAAAATGCTCATGTTGTGGAAACTTGGGTCACAATTCAAGGACTTGCAATAACCACAGTTTCAGTACTCATAGAGGGGGCTTAATTGGTGGAGTCAAGCTCTTTGGGGTCCAACTTGACCAATACCCTTCTTCTTCTTCTTCTTCACCTTCATATTTTGACATCAACTACCTGCTATCTTCAAGGAGGACGACCTCCTTATCTGTGACTTCCTCTTCCTCTTCCTCCTCCTCGCCTTGCATGCTTATTGGCGCAAATGAAAACTCACATAAAATGTGTCATAGTCACTTAGCCAGTGCCAGTGACCTTATGTCAACAATCAAAGACAACAACAAAGGTGTGCCATGGACGGAGGAGGAGCACCGTGTATTCCTTGTGGGGCTTGAGAGGCTGGGCAAGGGTAACTGGAGAGGCATATCTAGAAGCTTTGTGACAACAAGAACTCCAACCCAAGTGGCCAGTCATGCACAAAAGTACTTTCTGCGTCAGACTGACAATAGTTTCAGCAGAAAGAAACGCCGCCTCAGCCTGAACGATGTGGGAGTGGGAGATGAAAATAATACTTGCTTTTCTAGACCCAGTGAAGCTTTTGGACCATCTGGACTGTCACCTGCAGGGACAACTAATTTGACTCCAAATGGTATCAACTGTGTGAGCCAATTGAGGAGCAATAGCGTCGTTCTTTCTCAGTGGCTTTCGCATACTCAAGCCTTGCTGAACTGGGCTAACTCTTCAACTTCAACAAGTTGGACAATTCAAAATGCAGCACCTGATTTAGAACTGAAACTTGCAACTCCCACGCCTTTGGAGCTGAGCTAA 825 0.4582 MARKCSCCGNLGHNSRTCNNHSFSTHRGGLIGGVKLFGVQLDQYPSSSSSSPSYFDINYLLSSRRTTSLSVTSSSSSSSSPCMLIGANENSHKMCHSHLASASDLMSTIKDNNKGVPWTEEEHRVFLVGLERLGKGNWRGISRSFVTTRTPTQVASHAQKYFLRQTDNSFSRKKRRLSLNDVGVGDENNTCFSRPSEAFGPSGLSPAGTTNLTPNGINCVSQLRSNSVVLSQWLSHTQALLNWANSSTSTSWTIQNAAPDLELKLATPTPLELS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1983 274 Gene3D - 116 167 - -
Dod09g1983 274 Pfam Myb-like DNA-binding domain 117 162 IPR001005 -
Dod09g1983 274 SUPERFAMILY Homeodomain-like 113 166 IPR009057 -
Dod09g1983 274 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 272 - -
Dod09g1983 274 CDD SANT 117 162 IPR001005 -
Dod09g1983 274 PANTHER TRANSCRIPTION FACTOR KUA1 1 272 - -
Dod09g1983 274 SMART sant 114 164 IPR001005 -
Dod09g1983 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 166 IPR017930 -
Dod09g1983 274 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 113 165 IPR006447 GO:0003677
Dod09g1983 274 ProSiteProfiles Myb-like domain profile. 110 162 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1983 Dod-Chr9 41302654 41304611 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod09g1983 Myb_DNA-binding 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1983 - - aprc:113866246 238.039