Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1970 ATGAGCTGTGAAGATGATGGCCCAGAAAGAGCAAGGTTGAAATCGAGACAAGAAGAGCCATCGTTGAATTTGAAGCAGTGTTCAAGGCTCGCTAGCTTTAACCGTGACCTCATGGCTGGTGCGGTGATGGGTGGGGTGGTGCACACCATTGTTGCCCCTATTGAGAGGGCCAAGCTTTTGTTGCAGACTCAGGAGAGCAATTTGGCCATTGTTTCCAGTGGCCGCCGCAAATTCAAAGGCATGTTCGATTGCATAGTCCGCACTGTCAGGGAAGAAGGCATTCTCTCTCTGTGGCGTGGCAATGGCAGCAGTGTTCTCCGCTATTATCCTTCCGTGGCACTCAATTTCTCTCTCAAGGATCTATACCGAAGCATGTTAAGAGGGGGAAACTCTTCCGATAATAATATTTTCTCCGGTGCATCTGCCAATTTTGTCGCTGGGGCTGCAGCTGGTTGTACAACACTTGTCTTGGTATACCCCCTTGACATTGCACACACACGCCTTGCTGCTGACATTGGAAGGACAGAAGCACGTCAGTTTCAAGGCATCTACCATTTCCTGGCTACCATATTCCATAAGGACGGGATCCGGGGGATCTACAGAGGCCTTCCTGCATCTGTACAAGGGATGGTGGTGCACAGGGGCCTTTACTTTGGAGGCTTTGATACAATGAAAGAGATCTTGTCTGAAGAATCAAAACCTGAGTTGGCATTGTGGAAACGTTGGTTGGTAGCTCAGGCCGTCACAACCTCTGCAGGGTTGATATCTTATCCATTAGACACAGTTCGTAGGAGGATGATGATGCAGTCTGGGATGGAACATCCAGTGTACAACAGCACCCTGGACTGCTGGAGGAAGATCTACAGGAAAGAGGGGTTGGCTTCATTTTACCGTGGTACAGTTTCAAATGTGTTTAGGAGCACAGGTGCAGCAGCTATCTTAGTCTTGTATGACGAGGTTAAGAAATTTATGAACTGGAGGCGATTTTGA 990 0.4859 MSCEDDGPERARLKSRQEEPSLNLKQCSRLASFNRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVSSGRRKFKGMFDCIVRTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYRSMLRGGNSSDNNIFSGASANFVAGAAAGCTTLVLVYPLDIAHTRLAADIGRTEARQFQGIYHFLATIFHKDGIRGIYRGLPASVQGMVVHRGLYFGGFDTMKEILSEESKPELALWKRWLVAQAVTTSAGLISYPLDTVRRRMMMQSGMEHPVYNSTLDCWRKIYRKEGLASFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWRRF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1970 329 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 29 328 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dod09g1970 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 240 323 IPR018108 -
Dod09g1970 329 Pfam Mitochondrial carrier protein 141 230 IPR018108 -
Dod09g1970 329 Pfam Mitochondrial carrier protein 236 325 IPR018108 -
Dod09g1970 329 Pfam Mitochondrial carrier protein 33 127 IPR018108 -
Dod09g1970 329 PRINTS Adenine nucleotide translocator signature 241 257 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dod09g1970 329 PRINTS Adenine nucleotide translocator signature 111 123 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dod09g1970 329 PRINTS Adenine nucleotide translocator signature 138 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dod09g1970 329 PRINTS Adenine nucleotide translocator signature 33 45 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dod09g1970 329 PRINTS Adenine nucleotide translocator signature 78 99 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dod09g1970 329 SUPERFAMILY Mitochondrial carrier 31 319 IPR023395 -
Dod09g1970 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 125 IPR018108 -
Dod09g1970 329 Gene3D Mitochondrial carrier domain 35 329 IPR023395 -
Dod09g1970 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 227 IPR018108 -
Dod09g1970 329 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Dod09g1970 329 PRINTS Mitochondrial carrier protein signature 153 171 IPR002067 GO:0055085
Dod09g1970 329 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Dod09g1970 329 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Dod09g1970 329 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Dod09g1970 329 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Dod09g1970 329 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 29 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1970 Dod-Chr9 41185058 41190663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1970 30 321 Antiporters AT5G13490 40.333 6.12e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1970 K05863 - gmx:100797251 546.969