Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1958 ATGGTGCTCCTCCTTGGTGCCTGTCCTGAGTATGGGTGCTTGGTGTATGAATTCATGGACAATGGTAGCTTAGAAGACAGATTATTCCGGAAAAACAACAGCCCCCCTATGTCATGGAATTTGCGGTTCCAAATAGCTGCTGAGATAGCAACTGCACTTCTTTTCCTTCACCAAACAAAGCCAGAGCCCATTGTCCACCGAGACCTCAAACCAGCAAACATCCTCTTGGACAGGAACTACGTGAGCAAAATCGCGGATGTTGGTCTTGCGCGATTAGTCCCACCATCCGTAGCTGACAGTGTCACACAAAATTACATGACTTCAGCTGCTGGAACCTTTTATTACATTGATCCTGAGTACCAACAAAGTGGGATATTGACAACAAAGTCAGATATATATTCACTGGGGATACTGCTGCTGCAAATAGTCACAGCAAAGCCTGCCATGGGCCTTGCTCACCTAGTCAGGAGGGCAATTGAGAAGGGCAGGTTCTCAGATACGCTTGACCCTGTGGTGACTGATTGGCCCGTTGAGGAGGCTCTAGCATTTGCCAAATTGGCACTGAGCTGTGCCGAGCTCAGCAAGAAGGACAGGCCAAATCTTGCAACAGATATATTGCCAGAGCTTAACAGGTTAAGAAACATTGGAAGCAATCCACACCGTCATATTAAAGTCAAAATTAGCAGTGATGATCACGCCAAAATTAGCCAGACCTACCCCAAGAAAGGAATATTGCAGCAATTAAATATTGGAGACGACAGAATCAGTGCACCTAGGTTCAGAAAACGAATACAAGCAGCAAAAAGGGCTCAAATTATAAGTTTGCACGAGTTGGCAAGTGAAGCAAATTCTCCACCCTTTCCTCTGACAAAGAAAGATGTGCAAGAAGTTCTTTCATGTGGTGATGTACTTTCAACTTTACTAGAATTTGCCAGAATATCAAGTGAAAAGGAGGCCAGAATTCCCGCTTGCAAAGCAAAGTATAACCAGATCAGCATAAAGGGTCCTCCCATTTTAGCCCAAATGGATCATAGCAAGTGCAAGTGCTTCGGATTCATGAGAAAAGGCCTGTTTCCTTGGATCTTAAAAGTCGGGTTGACAGGGCTGGCTTTGTTTGCTAGAGTGACATACGAGGACAAGGTGGAAGCACCTTCAAGTGATGATGATCGCTTCTGCATCAGTGACTGTGCCACATGTCCATCATACCCTCCTCCACCGTCACCATCAACACCACATTATTCTCCACCTCCGTTATCTTATTTCACCTTCTCACCACCACCTCCTCACAAGTCATCATCACCACCACCACCTCCACCGCTATATTCTTCAGGGGCTGCTTCACCACCGCCACCTTTGAAGCCCTACAACACGCCTCCTTCTTCTTCAGGCTCAAGTCAACCGCAGCCTACGGTGATCTCAGGGCCGCATGACTATTACTACCCTTATTACTATTTTTACGCCTCAGGAGCTTCTTCTCCTTCCATTCATGCACCCTTTTTCGTCTTGTTATTGTTCCTACTTCCTAGTGGGGTATTCTTCGGTTG 1544 0.4624 MVLLLGACPEYGCLVYEFMDNGSLEDRLFRKNNSPPMSWNLRFQIAAEIATALLFLHQTKPEPIVHRDLKPANILLDRNYVSKIADVGLARLVPPSVADSVTQNYMTSAAGTFYYIDPEYQQSGILTTKSDIYSLGILLLQIVTAKPAMGLAHLVRRAIEKGRFSDTLDPVVTDWPVEEALAFAKLALSCAELSKKDRPNLATDILPELNRLRNIGSNPHRHIKVKISSDDHAKISQTYPKKGILQQLNIGDDRISAPRFRKRIQAAKRAQIISLHELASEANSPPFPLTKKDVQEVLSCGDVLSTLLEFARISSEKEARIPACKAKYNQISIKGPPILAQMDHSKCKCFGFMRKGLFPWILKVGLTGLALFARVTYEDKVEAPSSDDDRFCISDCATCPSYPPPPSPSTPHYSPPPLSYFTFSPPPPHKSSSPPPPPPLYSSGAASPPPPLKPYNTPPSSSGSSQPQPTVISGPHDYYYPYYYFYASGASSPSIHAPFFVLLLFLLPSGVFFG 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1958 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Dod09g1958 514 SUPERFAMILY Protein kinase-like (PK-like) 9 469 IPR011009 -
Dod09g1958 514 MobiDBLite consensus disorder prediction 426 470 - -
Dod09g1958 514 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 230 - -
Dod09g1958 514 SMART serkin_6 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1958 514 Pfam Protein kinase domain 11 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1958 514 PANTHER OS02G0152300 PROTEIN 1 230 - -
Dod09g1958 514 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1958 514 MobiDBLite consensus disorder prediction 426 457 - -
Dod09g1958 514 Gene3D Transferase(Phosphotransferase) domain 1 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1958 Dod-Chr9 41085832 41089186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1958 1 218 Receptor kinase-like Gene Family AT5G12000 79.817 4.17e-122 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod09g1958 Pkinase 9.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1958 - - lja:Lj3g3v0420630.1 377.096