Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1953 ATGGAGGAGATGTCGTCCACAGTTGCAGTGCCATTAACAGTAGGTAATTCAGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTTTCTAGACTTAAGCTGATGACAGATGCAGGGTTGTTAAGTAATTCTGTGACTAAGGTTCCCACTGAGACAGTTACTGGTTCTGAAGAGGATCATAATGGTGCCAATCTGGAGGATGAAGTTGGTATTGCAGCAGTCACACCATCAAAACAGGGAAGTGAAGGAGAAGTTCCTATGTTGGATATGATATCCCAAAATAAAAGCACTTTGGTTATTGGTGATGAAGTTTCAACCCCAGAAATAGAGGATGATGATTCCTTATCATTGGAAGGTGATCCGATTGTTGATAGCTCTTGTTCTCTTTCAGTAGCCAGTGAGAACAGTAGTATTTGTGGAGACGAGTTCATCAATTCTGAGGCTACTCCAGATTTAGGAACAAGTTCCACAGACATAGAGAAGAGCATCTGTGCTGTTGATGTTGCTGCCAGGGCTGCTGATTTTGGGGAGTCCAATGTTGAGGCGGATATTATGAGTGAACCCCTTTCTGTAGCAGTGAGCCTTGAAGAAGAGGCAGTAGTTACATCTGGCACAAATCCTACTACAGTTCTTCATCAGCTACCTCTGGATAAAGGGCTGAGTGGAACAGGTGGTCGGAGTGTTTTTGAATTGGATTGTACCCCACTTTGGGGATATACATCTCTGTGTGGAAAGAGACCTGAGATGGAAGATGCAGTTGCAGCTGTACCTCGATTTTTGAAAATTCCTATTGAAATGCTAATTGGTGATCGGGTAGTTGATGGATTGAGTAAGAGTCTGAGTCAGCAGACAATTCATTTCTTTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTAAAGTGTTATTTTGTTTTTAACATGATTCTTCTATCCAATGATTTAGCATTTTATGTGAGTCTTCACGTAAAACTTGCCTTTCCCATTCAGGTGGCAGATTATTGTCGTGATCGCATGCATTTGGCCTTGGCTGAGGAAATAGAAGTTGTCAGGGAAGGTCTTATAGTTGGAAGTGCCAAGGATGATTGTCAAGACCAGTGGAGAAAAGCTTTCACCAATTGTTTTTTGAAGGTTGATGCTGAAGTTGGGGGGAAAGTTAATAATGAACCTGTCGCCCCAGAAACTGTTGGATCAACTGCAGTTGTTGCTATTATCTGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCAGTTCTGTGTCGTGGCAAAGATGCCATGGCATTATCTGTTGATCATAAACCAAATCGAGATGATGAATCAGCAAGAATTGAGGCAGCAGGAGGGAAGGTGATCCAATGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCAAGGTCCATTGGTGATAGATATTTGAAGCCGTGGATAATTCCGGAACCAGAAGTTATGTTTCTTCCTCGCACTAAAGATGACGAGTGCCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGTCAAATGACGAGGTGTGTGACCTAGCTCGGAGGCGAATAAATCTCTGGCACAAGAAGAATGGCTTGGCACTGCTCCCAGAAAGGGGAGAGGGAGTCGATCCCGCGGCACAAGCAGCTGCAGAGTACCTATCAAACCGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACAGTGATTGTAGTTGATTTAAAAGCTCAAAGGAAATTCAAGAGCAAGACATGA 1749 0.434 MEEMSSTVAVPLTVGNSVCDKPTIATHMDVSRLKLMTDAGLLSNSVTKVPTETVTGSEEDHNGANLEDEVGIAAVTPSKQGSEGEVPMLDMISQNKSTLVIGDEVSTPEIEDDDSLSLEGDPIVDSSCSLSVASENSSICGDEFINSEATPDLGTSSTDIEKSICAVDVAARAADFGESNVEADIMSEPLSVAVSLEEEAVVTSGTNPTTVLHQLPLDKGLSGTGGRSVFELDCTPLWGYTSLCGKRPEMEDAVAAVPRFLKIPIEMLIGDRVVDGLSKSLSQQTIHFFGVYDGHGGSQVKCYFVFNMILLSNDLAFYVSLHVKLAFPIQVADYCRDRMHLALAEEIEVVREGLIVGSAKDDCQDQWRKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAIICSSHIIVSNCGDSRAVLCRGKDAMALSVDHKPNRDDESARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRTKDDECLILASDGLWDVMSNDEVCDLARRRINLWHKKNGLALLPERGEGVDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1953 582 ProSiteProfiles PPM-type phosphatase domain profile. 237 572 IPR001932 -
Dod09g1953 582 ProSitePatterns PPM-type phosphatase domain signature. 288 296 IPR000222 GO:0043169
Dod09g1953 582 SUPERFAMILY PP2C-like 234 573 IPR036457 -
Dod09g1953 582 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 330 582 - -
Dod09g1953 582 PANTHER ALPHABET, ISOFORM E-RELATED 102 303 - -
Dod09g1953 582 PANTHER ALPHABET, ISOFORM E-RELATED 330 582 - -
Dod09g1953 582 SMART PP2C_4 227 570 IPR001932 -
Dod09g1953 582 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 102 303 - -
Dod09g1953 582 Pfam Protein phosphatase 2C 329 565 IPR001932 -
Dod09g1953 582 Gene3D - 224 322 IPR036457 -
Dod09g1953 582 Gene3D - 329 582 IPR036457 -
Dod09g1953 582 CDD PP2Cc 239 572 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1953 Dod-Chr9 41028965 41034406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1953 1 582 PP2C-type Phosphatase Gene Family AT1G17550 47.659 5.23e-163 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1953 K14497 - gmx:102662702 843.958