Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1949 ATGGCAGATAAGGATCCACGACCAGCAGATTCACCTGACAGCGATTCCAACAACCAGTGGTTTTTCGAGCTCTCAGAGTACTTGAAGCTCGATGATGATCAATGGGCAGATGATGATGTTCCAGAGTCATCATCAGTTTCTGAGTATGTCCCGAGCCAGGACAATCGAGCCAATGAAGTAGGAGGGTTTGGAGGAAGTGGCAGCCACCTTGAGTGGTCTTCTACTACTGGAGACATTAGTGAACGTGAGAAGAAGGAAGGAAGAGACAGAGTTGCATTCAAAACCAAGTCAGAGGTTGAAGTACTAGACGATGGGTTCAGGTGGAGGAAGTACGGAAAGAAGATGGTTAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGCTCAGTGGACGGATGCCCGGTGAAAAAACGAGTTGAGAGAGACAGGGATGATCCGAAGTATGTAATAACAACCTACGACGGGACTCATACTCACCCAAGTTCTTAG 489 0.4724 MADKDPRPADSPDSDSNNQWFFELSEYLKLDDDQWADDDVPESSSVSEYVPSQDNRANEVGGFGGSGSHLEWSSTTGDISEREKKEGRDRVAFKTKSEVEVLDDGFRWRKYGKKMVKNSPNPRNYYRCSVDGCPVKKRVERDRDDPKYVITTYDGTHTHPSS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1949 162 SUPERFAMILY WRKY DNA-binding domain 95 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1949 162 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 161 - -
Dod09g1949 162 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1949 162 MobiDBLite consensus disorder prediction 33 90 - -
Dod09g1949 162 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1949 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 161 IPR044810 GO:0003700
Dod09g1949 162 Gene3D WRKY domain 89 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1949 162 MobiDBLite consensus disorder prediction 76 90 - -
Dod09g1949 162 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1949 Dod-Chr9 40994997 40996266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1949 26 161 WRKY Transcription Factor Family AT5G26170 54.902 1.88e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod09g1949 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1949 - - gmx:100819462 220.32