Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1943 ATGAGTTTAAGCGCAGCCGAGGATGATTCTTCTTCGGAGATTCACCTTCCAGCAGAGATAGACTGGCACATGCTCGACAAGTCCAAGTTCTTCTTCCTTGGCGCCGCCTTATTCTCTGGTGTCTCTGCTGCCCTTTATCCCATGGTCGTGTTGAAGACGCGCCAGCAGGTTTCTTCAGCACACTACTCGTGCCTCAACATGTCATGTGCCATTATGCGCTACGAAGGCTTCAGAGGCTTCTACAAAGGTTTTGGAACTTCCCTAATGGGAACCATCCCTGCTCGTGCACTCTACATGGCTGCTCTCGAAGTCACCAAGAGCAATGTTGGCACCGGCCTTGTTGATTTGGGTTTCTCGGATACCACTGCCACTGCAGCAGCTAATGCTGCTGCTGGTGTTACTTCTGCTATGGCTGCACAATTGGTTTGGACCCCAATTGATGTTGTGAGCCAAAGACTCATGGTCCAAGGCTGGAGTAGCACAAATGGTGGTGGAAGCACAAGCATACTTAGAAATCTTAACTCTGAGAATTACAGGAATGGTATTGATGCATTCAGGAAGATTCTGTGTGCGGATGGGGCTAGAGGGTTCTATAGGGGGTTTGGTATTTCAATATTGACTTATGCTCCATCCAATGCGGTTTGGTGGACTTCATATTCTATGGTCCATAGGGTCATATGGGGTGCTTTTGGTTCCTACATGTGCAAAAGGGATGAGGGTGGTTTGGCCAATGGGTGTGGTTTTAGGCCTGATTCCAAGGCAATGGTGGGTGTACAAGGGCTGAGTGCGGTTGTCGCCAGTGGGGTCTCAGCAATTGTGACAATGCCCCTTGACACGATCAAGACAAGGTTGCAGGTGTTGGATTCTGAGGAGAATGGGCGCAGGAGGCCCTTAACTTTTGTTCAGACCGTTCGGAGTTTGGTTAAGGAAGGTGGTTTGCTCGCTTGTTACAGAGGGTTGGGGCCAAGGTGGGCTTCCATGTCCATGTCTGCAACAACCATGATTACTACTTACGAGTTCTTGAAGCGGTTGTCTACCAAGAGTCAAGAGAAATTGACCCCATGA 1065 0.4939 MSLSAAEDDSSSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSAHYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMAALEVTKSNVGTGLVDLGFSDTTATAAANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGWSSTNGGGSTSILRNLNSENYRNGIDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRVIWGAFGSYMCKRDEGGLANGCGFRPDSKAMVGVQGLSAVVASGVSAIVTMPLDTIKTRLQVLDSEENGRRRPLTFVQTVRSLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRLSTKSQEKLTP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1943 354 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 351 - -
Dod09g1943 354 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 351 - -
Dod09g1943 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Dod09g1943 354 SUPERFAMILY Mitochondrial carrier 23 341 IPR023395 -
Dod09g1943 354 PRINTS Mitochondrial carrier protein signature 263 285 IPR002067 GO:0055085
Dod09g1943 354 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Dod09g1943 354 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Dod09g1943 354 Gene3D Mitochondrial carrier domain 29 353 IPR023395 -
Dod09g1943 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 225 IPR018108 -
Dod09g1943 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 254 344 IPR018108 -
Dod09g1943 354 Pfam Mitochondrial carrier protein 259 348 IPR018108 -
Dod09g1943 354 Pfam Mitochondrial carrier protein 124 227 IPR018108 -
Dod09g1943 354 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1943 Dod-Chr9 40974126 40976491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1943 1 350 Chloroplast and Mitochondria Gene Families AT1G72820 64.873 4.04e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1943 K15121 - gmx:100784202 540.421