Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1937 ATGGATGCTAATAATAATAAGCATCAAGCTCCAAAAGGCGGCGGCGAAGTAAGCATGACGGAGAAGCAAACAGCAAACGGAGGAAGCGAAGTGGTTGTGGCGATCCCAAGCGAGAGCCATGATTCCAAAGGGGTTGATGAATCTTTGACTCTTAAGCAGAGCAAGGTTGTGGTGGATCCCTCTCTCACAATGCACAACGACACCGATTTCGGTTCAGGGTATGGAACAAAGTCTCCACCTTTGAACTGTGCTTCCCCTGAGATAAGGTTCATTCCCAGCCCAAATAAGCCCCCCAAAGTTCCCACCCCAAACGCCAACCTTGTCAGAAGGAAATCACTTGCAAGGTCAATGTATTCCAAACCCAAATCAAGGTTTGGTGAACAGCCTTATCCCATTGATGGCACCCTTTTAGAAGAGAATAGGGACAGCACTTCAACTTTGCAAGAACAGTTGGCTGTTAACTCACCATATAGGAACTCCTTCAAAGCATCATCGCCAATGAACAAATCTGGGGTTGTTAATAGAACAGTCTCCATCACTTCCATCACTCCCAAGACACCACTGATGGCGTCTCCTGGGCCTGCTGGGGAGGATGAAGATGAAATCATTTATAGGAAAGTTGAATTGAGCAAAGGAAAGCGTAATAGGTTGACAACTAAGGTTTTGATGGAATGGTTTGTGTTTGTGTGCATTGCGGGTAGCCTGCTGGCTAGCTTGACAGTTCACAAGCTCAACGAGACAACGATTTGGAGCTTGAGGCTTTGGAGGTGGTGTGTGCTTGTGATGGTGACCTTTTGTGGCATGTTAGTTACCAAATGGTTCATGCACATTGTTGTTTTCTTGATTGAAATGAACTTTTTGCTGAGGAAAAAGGTGCTCTATTTTGTTCATGGACTGAAAAAATGTGTCCAGGTGTTCATTTGGCTTGGTTTGGTTCTTCTCACTTGGGTGCTGTTAATCAATCGAGTGGTGCAGCGATCTGAATTGGCGACAAAGATTTTGGATGGTGTAACATGGACTCTTCTCTCCCTTCTTATTGGAGCATTCTTGTGGATGTTAAAGACATTGTTGCTAAAGATTTTGGCATCGAATTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAGTCAATCTTCCATCAGTACATTTTGCAGACTCTGTCTGGGCCTCCGCTTATAGAAGAGGCTGAGAAGGTTGGGCGATCACTTAGTATTGGTCAATTTAGTTTCAGGAGTACAACGAGTAAAGGTGGAAAAAAGAAAGAAGTTATTGATATGGCGAAGCTTCACAAGATGAAACAAGAGAAAGTTTCTGCCTGGACTATGAAGGTGTTGATAGATGCAGTGACAAATTCAGGTCTGTCCACAATCTCTAATTCATTAGATGAAAGTTTCGATGATGGAGGAAATGAGCAAACTGATAAAGAGATTACAAATGAGATGGAAGCAACTGCTGCTGCCTTTCACATCTTTAGGAATGTTGCTACCCCTGGTTGCACGTACATCGATGAGTACGAACTCCGGAGGTTTATGATTAAGGAAGAAGTTTATGCGGTATTTCCCCTACTGGCAAAGGCAGAGATAGGACAAATTACCAGAAAGTCTTTAGCAAACTGGGTGTTGAAGGTATATCAGGAACGAAAGGCACTGGCGCATGCCTTAAGCGACACCAAAACAGCTGTAAAACAACTAGGCAAACTTGTGACTGGGATCCTAGTAGTGGTGACCACCATAGTGTGGCTTCTACTTATGGGGATTGCAACGACAAAAGTACTTGTATTCCTCTCATCACAGCTAGTACTCGCAGCTTTCATGTTTGGAAACACATGCAAGAATATTTTTGAAGCTATCATCTTCGTGTTTGTAATGCATCCATTTGACGTTGGTGATCGATGTGTTGTAGATGGCGTTGAGCTACTGGTGGAAGAAATGAATATACTGACAACAGTATTCTTGAAGCTGAATAATGAAAAGGTGTACTATCCAAATGCAGTCCTGGCTACAAAACCGATTAGCAATTATTACAGAAGCCCAGATATGGTTGATCCTGTGGAGTTCTCCGTTGATTTTATGACACCAGCAGAGAAAATTGGGGCAATGAAAGAAAAAATAAAGAGGTACCTAGAGAGAAATCCACAATACTGGCATCCTAATCACGGATTAGTAGTGAGGGAGATTGAAAATGTAAACAAGATTAAGATGAGTCTCGTGGTTACCCACACAATGAACTTTCAAGAATATGGGGAGAAGAACAAGCGCAAAACTGAGCTTGTGATGGAAATAAAGAGAATATTTGAAGAGCTAAATATCAGATACAACCTTCTACCTCAGGATGTTCATATCAGCCATATTGAACCAGTCCCAGATATGAGTGCACTCAAGAGGTGA 2388 0.4255 MDANNNKHQAPKGGGEVSMTEKQTANGGSEVVVAIPSESHDSKGVDESLTLKQSKVVVDPSLTMHNDTDFGSGYGTKSPPLNCASPEIRFIPSPNKPPKVPTPNANLVRRKSLARSMYSKPKSRFGEQPYPIDGTLLEENRDSTSTLQEQLAVNSPYRNSFKASSPMNKSGVVNRTVSITSITPKTPLMASPGPAGEDEDEIIYRKVELSKGKRNRLTTKVLMEWFVFVCIAGSLLASLTVHKLNETTIWSLRLWRWCVLVMVTFCGMLVTKWFMHIVVFLIEMNFLLRKKVLYFVHGLKKCVQVFIWLGLVLLTWVLLINRVVQRSELATKILDGVTWTLLSLLIGAFLWMLKTLLLKILASNFHVKSFFDRIQESIFHQYILQTLSGPPLIEEAEKVGRSLSIGQFSFRSTTSKGGKKKEVIDMAKLHKMKQEKVSAWTMKVLIDAVTNSGLSTISNSLDESFDDGGNEQTDKEITNEMEATAAAFHIFRNVATPGCTYIDEYELRRFMIKEEVYAVFPLLAKAEIGQITRKSLANWVLKVYQERKALAHALSDTKTAVKQLGKLVTGILVVVTTIVWLLLMGIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNILTTVFLKLNNEKVYYPNAVLATKPISNYYRSPDMVDPVEFSVDFMTPAEKIGAMKEKIKRYLERNPQYWHPNHGLVVREIENVNKIKMSLVVTHTMNFQEYGEKNKRKTELVMEIKRIFEELNIRYNLLPQDVHISHIEPVPDMSALKR* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1937 795 Pfam Mechanosensitive ion channel 566 771 IPR006685 GO:0016020|GO:0055085
Dod09g1937 795 Gene3D - 625 674 IPR023408 -
Dod09g1937 795 MobiDBLite consensus disorder prediction 1 52 - -
Dod09g1937 795 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 19 782 - -
Dod09g1937 795 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 19 782 IPR016688 -
Dod09g1937 795 PIRSF Memb_At2g17000 2 791 IPR016688 -
Dod09g1937 795 SUPERFAMILY Sm-like ribonucleoproteins 615 674 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1937 Dod-Chr9 40912272 40915747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1937 19 782 Mechanosensitive Ion Channel Family AT5G12080 57.588 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1937 K22048 - gmx:100803107 1152.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1937 09 40912272 40915747 Dod09g1937 09 40912272 40915747 ECH