Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1927 ATGGCTACTCATCTCCTCAAGCTCTCTCTCTCCCCGCAACCCAACCTCTCTTTCAACTACACATCAAATCCCAATGCTCAATTGCTCTCTCTCCTCCCCACAAAACGGCGCCGTAACGACCGCCACCGTAACTGTCACCGCCGGGGATATCTCCGGCCACATTTCCTCGTTTCAAATTCGCTCCGTACTGATATCGGATCGACGGAACCAGCTCTTCTTCAGAACAAAGACTCGCCGCTTCTTCTCGACGTTTCTGGCATGATGTGCGGCGCGTGCGTCTCACGAGTCAAGAACATCCTCTCCGCCGACGAACGAGTTGACTCGGTCGTCGTCAACATGTTGACCGAGACAGCAGCCGTCAAGCTGCGGCGGCTCGACGAGGAGGAATCGGAGACCGTGGCGGAGAGCCTGGCCCGGAGGTTGAGCGAGTGCGGGTTCCCGACGAAGCGGAGGGCGTCGGGTGCGGGAGTGGCGGAGAACGTGAGGAAGTGGAAGGAGCTGGTGAAGAAGAAGGAGGAGCTCGTCGTCAAGAGCCGTAGCCGCGTGGCTTTCGCTTGGACTCTGGTGGCGCTGTGCTGTGGATCGCACGCTTCGCACATTCTTCATTCCCTGGGATATCACATGGCTCACGGATCGGTTTGGGAAATTCTTCATAATTCGTATGTGAAAGGTGGTCTAGCTTTGGGAGCTCTCTTGGGACCAGGACGAGAGTTACTCCTTGATGGCCTAAACGCATTTAGGAAGGGATCGCCGAACATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCTTTATCATCAGTTCGATATCAGTACTGAACCCTGGGTTGGCATGGGATGCATCATTCTTTGATGAACCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGACGTTCTCTGGAGGAAAAGGCAAGGATTCAGGCATCTAGTGACATGAATGAACTTCTTTCATTGATATCTACTCAGTCAAGACTTGTGATTACTTCATCAGAAGGTTCACTGTCTACTGACAATGTGCTTTGTTCTAATGCAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTTGGTGACTCGGTGTTGGTGTTGCCTGGAGAGACTATTCCTATAGATGGAAAGGTCATTTCCGGAAGAAGTGTCGTGGACGAATCCATGCTTACAGGAGAATCGCTTCCTGTATTTAAGGAGGAAGGCCTCACAGTTTCTGCAGGAACGATAAATTGGGATGGTCCTTTAACAATTGAAGCTTCTTCAACTGGCTCCAACACAATGATATCCAAGATTGTACGCATGGTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCAGATTCCATAGCAGGGCCATTTGTATACAGTGTGATGACTCTGTCAGCAGCTACATTTGCATTTTGGTATTATATTGGATCACACATATTTCCTGATGTTTTGCTGAATGATATTGCTGGCCCAGAAGGAGATCCTTTGCTTCTGAGTTTAAAACTCGCTGTAGATGTTTTGGTTGTCTCTTGCCCTTGTGCACTGGGTCTTGCCACACCCACGGCAATCCTGGTTGGCACATCACTTGGGGCAAGGAAAGGACTTCTTATTAGAGGAGGAGATGTACTGGAACGCTTGGCCAGCATAAATTATATTGCTCTAGACAAGACAGGAACCCTCACCCGAGGAAAACCGGTTGTCTCTGCTGTAAGCTCTATTCATTATGGAGAGTCAGAAATACTTCAGATTGCTGCTGCAGTGGAGAAAACGGCATCTCATCCAATAGCAAACGCTATTGTCAATAAAGCAGAGTCATTAGAGCTGGTCCTTGCAGTCACAAAAGGGCAGATAGTTGAACCAGGTTTTGGAACCTTGGCAGAAATAGATGGGCGTTTGGTCGCAGTTGGATCTTTAGAATGGGTCCATGAACGCTTCCAGACAAGAGTGAACTCAGCTGATTTATTGAATCTTGAACATACGTTGATGAAACATTCATCAGATACGACATCTTCAAACTATTCGAAAACTGTTGTCTATGTTGGACGTGAAGGGGAAGGCATCATTGGTGCTATTGCCATATCTGACATTGTGCGTGAAGACGCTGAATCTACTGTAATGAGGTATGTTTATATTTTGGTATATTTATCCTCGAAAGTCAGCAAACTAACCACTCCTTTTTGGCAAACAATACTACTGCTTCTACCGGCCAAATGTGAGTTTGGTTCACTTCATTTCTTCAGAAAAAGGGGCTGTGCTTCGTGTTTGTGTGTATTCCAACAATACCTCTGCTTCTTCAAACCTTATGTGAATTATTACTACTTTTTATCTATGCATTTTTTCTGA 2331 0.471 MATHLLKLSLSPQPNLSFNYTSNPNAQLLSLLPTKRRRNDRHRNCHRRGYLRPHFLVSNSLRTDIGSTEPALLQNKDSPLLLDVSGMMCGACVSRVKNILSADERVDSVVVNMLTETAAVKLRRLDEEESETVAESLARRLSECGFPTKRRASGAGVAENVRKWKELVKKKEELVVKSRSRVAFAWTLVALCCGSHASHILHSLGYHMAHGSVWEILHNSYVKGGLALGALLGPGRELLLDGLNAFRKGSPNMNSLVGFGSIAAFIISSISVLNPGLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGSLSTDNVLCSNAICVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLTIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYYIGSHIFPDVLLNDIAGPEGDPLLLSLKLAVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINYIALDKTGTLTRGKPVVSAVSSIHYGESEILQIAAAVEKTASHPIANAIVNKAESLELVLAVTKGQIVEPGFGTLAEIDGRLVAVGSLEWVHERFQTRVNSADLLNLEHTLMKHSSDTTSSNYSKTVVYVGREGEGIIGAIAISDIVREDAESTVMRYVYILVYLSSKVSKLTTPFWQTILLLLPAKCEFGSLHFFRKRGCASCLCVFQQYLCFFKPYVNYYYFLSMHFF* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1927 776 Pfam haloacid dehalogenase-like hydrolase 545 701 - -
Dod09g1927 776 SUPERFAMILY Calcium ATPase, transmembrane domain M 285 543 IPR023298 -
Dod09g1927 776 Gene3D - 305 436 - -
Dod09g1927 776 Pfam Heavy-metal-associated domain 82 146 IPR006121 GO:0046872
Dod09g1927 776 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Dod09g1927 776 SUPERFAMILY Calcium ATPase, transduction domain A 343 432 IPR008250 -
Dod09g1927 776 Gene3D - 71 152 - -
Dod09g1927 776 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 551 646 IPR023299 GO:0000166
Dod09g1927 776 Pfam E1-E2 ATPase 346 529 - -
Dod09g1927 776 PRINTS P-type cation-transporting ATPase superfamily signature 382 396 - -
Dod09g1927 776 PRINTS P-type cation-transporting ATPase superfamily signature 685 696 - -
Dod09g1927 776 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Dod09g1927 776 SUPERFAMILY HMA, heavy metal-associated domain 79 147 IPR036163 GO:0046872
Dod09g1927 776 Gene3D - 560 693 IPR023299 GO:0000166
Dod09g1927 776 ProSiteProfiles Heavy-metal-associated domain profile. 79 150 IPR006121 GO:0046872
Dod09g1927 776 PANTHER ATP7, ISOFORM B 79 703 - -
Dod09g1927 776 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 253 701 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod09g1927 776 CDD HMA 82 147 IPR006121 GO:0046872
Dod09g1927 776 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 333 606 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod09g1927 776 Gene3D - 540 702 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1927 Dod-Chr9 40836210 40843677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1927 235 697 Primary Pumps ATPases AT5G44790 34.086 3.92e-69 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1927 K17686 - gmx:100127402 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1927 09 40836210 40843677 Dod09g1927 09 40836210 40843677 ECH