Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1926 ATGGCATTTCGGTTTGGACTTGTTCTTCTGGCTTTTCTCCTTTGTTTGAATATCAATTCGGTGGACTCAGATGATGGAGCAACGCTGTTAGAGATAAAGAAGTCATTCAGGGATGTGGATAACGTTCTGTATGACTGGACAGAATCACCATCATCAGATTGTTGTGTTTGGACAGGGGTCACATGTGATAATGTCACCTTCCTTGTCGTTGCACTCAATCTTTCAGGATTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAACCTTAAAAGCTTGGTCTCTATAGATCTCAAGGAAAACCGTCTATCAGGCCAGATTCCAGATGAGATTGGTGATTGTTCTTCTTTGAAAAACCTGGACTTGTCATTTAATGAGATTCAGGGCGATATACCATTCTCAATTTCAAAGTTGAAACAACTGGAAAATCTAATCTTGAAGAATAACCTGTTGATTGGGCCAATTCCTTCAACTCTCTCTCAGATTCCTAACTTAATGATTCTTGACTTGGCTCATAATAATCTAAGTGGGGAGATACCGAGGCTTATATACTGGAATGAAGTTTTGCAGTATCTTGGCTTGCGAGGTAACAATTTGGTGGGTTCACTTTCTCAAGACATGTGCCAGTTAAATGGGTTGTGGTATTTTGATGTGAGAAACAATAGCTTGACAGGCAGTATTCCTGAAAACATTGGCAACTGTACTTCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTGACTGGAGAGATACCATTCAATATTGGATTTCTGCAAGTAGCAACCCTGTCATTGCAAGGCAATAGACTCTCTGGACATATTCCATCAGTCATCGGTCTGATGCAAGCGCTTGCTGTCTTAGATTTGAGTTGTAACATGTTAAGTGGACCAATTCCTCCTATCTTGGGAAATTTAACTTACACAGAAAAATTGTATTTGCATGGAAACAAGCTGACTGGCCTCATCCCTCCGGAGCTTGGAAATATGACAAAGCTTCACTATCTGGAACTGAATGATAATAATTTAAGTGGGCATATTCCACCTGAGCTTGGACAGCTTACTGATCTGTTTGACTTAAATGTTGCCAACAACCACCTTGAGGGTCCAATTCCTGATAATATTAGCTCATGTAAAAACCTCAACAGCCTCAATGTGCATGGGAATAAGTTGAATGGAACAATCCCCCCAGGATTTCAGAGATTAGAGAGTATGACTTATCTGAATCTTTCCTCCAACAATCTTCAAGGCTCCATTCCAATTGAACTGTCACGAATCGGAAACTTGGATACACTGGATATTTCAAATAATAATATAAGTGGCTCCATTCCTTCTCCTGTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAATCATTTAACAGGAGTTATTCCAGCAGAATTTGGTAATCTAAGAAGTGTCATGGAAATTGATCTTTCATATAATCTGCTCTCTGGCTTGATTCCTGAAGAAATTGGTCAGCTTCAGAACATGATGTCCTTGAGACTCGAAAACAACAAATTGTCTGGGGATGTGGCATCCCTTGTAAATTGCCTGAGTCTTTCTTTGCTCAATATCTCCTATAACAATCTAGTTGGTGTTATTCCCACAAGCAACAATTTTTCCAGGTTTTCCCCGGACAGTTTCATTGGAAACCCTGGGCTTTGTGGTTATTGGCTGAATTCACCTTGTCATGGGTCTCATCATGCAGAACGAGTTACATTGTCCAAGGCAGCTATCCTAGGAATTGCTCTTGGTGCCCTTGTGATTCTTCTTATGATATTGCTGGCTGCTTGCAGACCACAAAGACCACCTCATATTCCTGATGCATCACTTGACAAACAAGTCTTTTACTCACCACCAAAGCTAGTGATTCTTCACATGAATATGGCACTTCATGTGTATGAGGATATCATGAGGATGACTGAAAACTTGAGTGAGAAATATATAATAGGGCATGGTGCATCAAGTACAGTTTATAAATGTGTACTTAAGAATTGCAAGCCAGTGGCTATCAAGAAGATCTATTCTCACTATCCACAAGGCTTGAAGGAGTTCGAGACCGAACTTGCTACAGTTGGCAGCATCAAGCACCGGAATCTGGTCAGTCTCCAAGGGTACTCCTTGTCTTCATATGGGAACCTTCTCTTTTATGACTACATGGAAAATGGCAGTCTGTGGGATCTTCTTCATGGACCTACTAGGAAGAAAAAGCTTGACTGGGATCTTAGACTAAAGATAGCACTAGGAGCAGCACAAGGACTGGCGTATCTACACCATGATTGCACTCCACGCATCATTCACAGAGATGTGAAATCATCTAACATTTTACTAGACAGAGACTTTGAGCCCCACCTCACTGATTTTGGCATTGCCAAAACTCTTTGCTCCTCAAAGTCCCACACCTCAACTTCCATAATGGGCACAGTTGGGTACATAGACCCTGAGTATGCTAGAACCTCCCGGCTAACTGAGAAGTCTGATGTGTACGGCTATGGCATTGTTTTACTTGAGCTACTAACCGGAAGGAAAGCTGTTGACAACGAATCCAACCTTCATCACCTGATTTTGTCCAAGACTGCTGACAATGCAGTAATGGAAACCGTTGTTCCGGATATTACTGGCACATGTAAGGATATGGGAGAAGTGAAAAGGGTTTTCCAGCTTGCTCTCTTATGCACCAAGAGAAAGCCAAGTGAGAGACCTACGATGCATGAGGTGACACGCTTGCTGGGGAGTCTTGTTCCATCATCCATGAACATGCACGTGCCAATGAAATTACAACTACAAGATGCAGGTGAATGTGATTCACAGTGA 2823 0.4183 MAFRFGLVLLAFLLCLNINSVDSDDGATLLEIKKSFRDVDNVLYDWTESPSSDCCVWTGVTCDNVTFLVVALNLSGLNLEGEISPAIGNLKSLVSIDLKENRLSGQIPDEIGDCSSLKNLDLSFNEIQGDIPFSISKLKQLENLILKNNLLIGPIPSTLSQIPNLMILDLAHNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSQDMCQLNGLWYFDVRNNSLTGSIPENIGNCTSFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNRLSGHIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGLIPPELGNMTKLHYLELNDNNLSGHIPPELGQLTDLFDLNVANNHLEGPIPDNISSCKNLNSLNVHGNKLNGTIPPGFQRLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISNNNISGSIPSPVGDLEHLLKLNLSRNHLTGVIPAEFGNLRSVMEIDLSYNLLSGLIPEEIGQLQNMMSLRLENNKLSGDVASLVNCLSLSLLNISYNNLVGVIPTSNNFSRFSPDSFIGNPGLCGYWLNSPCHGSHHAERVTLSKAAILGIALGALVILLMILLAACRPQRPPHIPDASLDKQVFYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKKIYSHYPQGLKEFETELATVGSIKHRNLVSLQGYSLSSYGNLLFYDYMENGSLWDLLHGPTRKKKLDWDLRLKIALGAAQGLAYLHHDCTPRIIHRDVKSSNILLDRDFEPHLTDFGIAKTLCSSKSHTSTSIMGTVGYIDPEYARTSRLTEKSDVYGYGIVLLELLTGRKAVDNESNLHHLILSKTADNAVMETVVPDITGTCKDMGEVKRVFQLALLCTKRKPSERPTMHEVTRLLGSLVPSSMNMHVPMKLQLQDAGECDSQ* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1926 940 Gene3D Phosphorylase Kinase; domain 1 620 722 - -
Dod09g1926 940 Pfam Protein kinase domain 650 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1926 940 SUPERFAMILY L domain-like 306 560 - -
Dod09g1926 940 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Dod09g1926 940 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Dod09g1926 940 SUPERFAMILY L domain-like 23 306 - -
Dod09g1926 940 Gene3D Ribonuclease Inhibitor 22 186 IPR032675 -
Dod09g1926 940 Gene3D Transferase(Phosphotransferase) domain 1 723 930 - -
Dod09g1926 940 ProSitePatterns Protein kinases ATP-binding region signature. 653 676 IPR017441 GO:0005524
Dod09g1926 940 SMART LRR_typ_2 473 497 IPR003591 -
Dod09g1926 940 SMART LRR_typ_2 329 353 IPR003591 -
Dod09g1926 940 SMART LRR_typ_2 449 472 IPR003591 -
Dod09g1926 940 SMART LRR_typ_2 401 425 IPR003591 -
Dod09g1926 940 SMART LRR_typ_2 210 234 IPR003591 -
Dod09g1926 940 SMART LRR_typ_2 162 186 IPR003591 -
Dod09g1926 940 SMART LRR_typ_2 90 114 IPR003591 -
Dod09g1926 940 ProSiteProfiles Protein kinase domain profile. 647 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1926 940 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Dod09g1926 940 Gene3D Ribonuclease Inhibitor 187 260 IPR032675 -
Dod09g1926 940 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 5 924 - -
Dod09g1926 940 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Dod09g1926 940 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Dod09g1926 940 SMART serkin_6 647 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1926 940 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 924 - -
Dod09g1926 940 Gene3D Ribonuclease Inhibitor 261 575 IPR032675 -
Dod09g1926 940 SUPERFAMILY Protein kinase-like (PK-like) 624 913 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1926 Dod-Chr9 40820309 40827514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1926 92 936 Receptor kinase-like Gene Family AT5G07180 66.352 0.0 1120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Dod09g1926 Pkinase 5.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1926 K20718 - gmx:100782307 1564.67