Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1919 ATGAGTTCAAGGAAGATTACATGGAAATCTATGGTCTTGATCTTAAACTGTTACAAGACCAAATGCCACCAGGAGGAGGAATCAGAAAAACAGGTTTTGAAACAAGGCTCTTTCCAGAGGCTATGCCTCGCGGATATAAGCATTTCTAGCTCCACTCAGACCATTGAAGACATTTCCACTTCCCTAGTTGGCTCAAAGCTCTACACATTCGCCCTGGAGGAGCTAAGAGAAGCAACACATAATTTCTCATGGAGTAATCTGCTCGGTGAAGGCGGGTTTGGACCTGTGTACAAAGGTTTTTTTGATGACAAAGTTAGGCGTGGTTTGAAGGCTCAGCCTGTAGCTGTGAAACAACTAGATTTGGATGGTTTGCAGGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTAAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTGTGAGGAGGAGCACAGGCTTTTGGTGTATGAATACATGGCAAGAGGCAGCTTAGAGAATCAACTGTTCAGAAGATATTCATCTGCCTTGCCATGGTCAACCAGGATGAAAATTGCATTAGGTGCGGCAAAGGGCCTGGCCTTCCTTCATGAAGAAGATAAACCTGTAATCTACAGGGATTTCAAAACTTCAAATATTTTACTGGACTCGGACTACACTGCTAAACTATCAGACTTCGGGCTAGCGAAGGATGGCCCTGAAGGGGAAGACACACATGTAACAACAACACGCATCATGGGAACAAAAGGCTATGCTGCTCCTGAATACATCATGGCAGGCCACCTTTCCACCAAAAGCGATGTGTATAGCTATGGGGTGGTTCTGTTGGAACTGCTTACAGGGAAAAGGGTAGTGGATAGGAACCGGCCAAATCGAGAGCGAAGCCTTGTGGAATGGGCAAGACCTCTGTTGAGAGATCAAAAGAAGCTGCACCTTGTCATAGACCCAAGATTGGAAGGGCAGTTTCCCATCAAAGGAGCAGCCAAGGTTGCAGCATTGACTTATAAATGCTTGTGCCACAACCCAGATCCAAGGCCCTCTATGAGTGACGTGGTAAAGACATTGGAGTCACTTCAGGACTTTGATGATGTGTTCATTGGACCATTTGTGTATGTAGCCGTAAATGAAAAAGGTGGCCACTAA 1158 0.4551 MSSRKITWKSMVLILNCYKTKCHQEEESEKQVLKQGSFQRLCLADISISSSTQTIEDISTSLVGSKLYTFALEELREATHNFSWSNLLGEGGFGPVYKGFFDDKVRRGLKAQPVAVKQLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMARGSLENQLFRRYSSALPWSTRMKIALGAAKGLAFLHEEDKPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGEDTHVTTTRIMGTKGYAAPEYIMAGHLSTKSDVYSYGVVLLELLTGKRVVDRNRPNRERSLVEWARPLLRDQKKLHLVIDPRLEGQFPIKGAAKVAALTYKCLCHNPDPRPSMSDVVKTLESLQDFDDVFIGPFVYVAVNEKGGH* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1919 385 SUPERFAMILY Protein kinase-like (PK-like) 57 362 IPR011009 -
Dod09g1919 385 CDD STKc_IRAK 88 363 - -
Dod09g1919 385 ProSiteProfiles Protein kinase domain profile. 82 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1919 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Dod09g1919 385 Gene3D Phosphorylase Kinase; domain 1 42 164 - -
Dod09g1919 385 PANTHER OS01G0588500 PROTEIN-RELATED 22 384 - -
Dod09g1919 385 PANTHER KINASE 1B 22 384 - -
Dod09g1919 385 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Dod09g1919 385 Gene3D Transferase(Phosphotransferase) domain 1 165 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1919 Dod-Chr9 40759097 40761451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1919 69 360 Glycoside Hydrolase AT3G07070 53.220 3.16e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod09g1919 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1919 - - gmx:100805771 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1919 09 40759097 40761451 Dod09g1919 09 40759097 40761451 ECH