Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1917 ATGATGCACATGACCTTTTACTGGGGCAAGAAGGTAACCCTTCTCTTCGACACATGGAAGACCGATTCGTGGACGAGTTACGCGCTGAGTCTGATCGCGTGCCTCGTCGTCTCCGTTTTCTACCAGTATATCGAGAACCGCCGCATTCGCCTGAAGCTGTTGGCCGCCGGGACGCATTCTGCGGCGGCGCCGGAGATCGAGGCACCTCTACTGCGGCGGAAGCTCGTCGGAGACAGGGCTAGGCTGGGAGTGGAGTTCGCGGGATCGGTGCTGTTTGGGGTGAGCTCGGCGATCGGGTACCTGTTGATGCTGGCGGTGATGTCCTTCAACGGAGGGGTGTTTGTGGCCATCGTGGTTGGTCTCGCCATCGGTCATTTCTTCTTCAGGAACGAGGGTGAAGCTTCTGTTGTTGTTGACAGTTCTTGTGCCTGTGCTTGA 438 0.5753 MMHMTFYWGKKVTLLFDTWKTDSWTSYALSLIACLVVSVFYQYIENRRIRLKLLAAGTHSAAAPEIEAPLLRRKLVGDRARLGVEFAGSVLFGVSSAIGYLLMLAVMSFNGGVFVAIVVGLAIGHFFFRNEGEASVVVDSSCACA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1917 145 Pfam Ctr copper transporter family 4 128 IPR007274 GO:0005375|GO:0016021|GO:0035434
Dod09g1917 145 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 145 IPR007274 GO:0005375|GO:0016021|GO:0035434
Dod09g1917 145 PANTHER CTR FAMILY COPPER TRANSPORTER 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1917 Dod-Chr9 40749906 40751050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1917 1 145 Inorganic Solute Cotransporters AT5G20650 54.667 3.17e-53 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1917 K14686 - gmx:100801036 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1917 09 40749906 40751050 Dod09g1917 09 40749906 40751050 ECH
Dod08g1817 08 42743452 42744253 Dod09g1917 09 40749906 40751050 ECH