Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g1911 | ATGGTGCATTGTTGTCTGAATTGCAAAGCCCAGAGCAACGCAACTATAAGGATGTGGACGACTAAATTGAAGACGTTACATAAGCGCATGTCTAATGAACTTGCAAAAGTTTTATATTGCCTTGAAGATCTTGGACTCCTATGTGCTTATGAGGCTGTTAAAATATGGCACGAGAATTTCTCCAAAGTTGAAGGAGAGTGTGAAGTTTACCGAAAAGCTTATCTGCACTGTAAAGTTTTCATTGATGAAGTAATACAAACAATTCAAGAATCTCTTCATCTTGATGATAGCAAGATTCTGGAGGTTCAGTTTGATTTTTCAAAGGCAGTAAACTTGGGATATTTATCTCCGAAATTACTTGAACTTATAAAACTCATCCAGTCCTTTGGAGACTCATGCAAGGTATTGTGCCTCGTTTTTGTTGAAAGAATCATTACAGCTAAGGTGATTGAAAGATTTATAAAGAAAGTTCCACAGATATCTCATTTCACAGTTTCCTATTTAACTGGAAACAGTACATCAGTTGATGCGCTGACTCCTAAGAGGCAGAAAGAGATATTGGATTCTTTCCGTTCTGGAAAGGTCAATATATTATTTACTACGGACGTCATTGAGGAAGGAATTCATGTGCCAAACTGCTCTTGTGTTATACGTTTTGACCTACCTAAGACAGTTCGCAGTTATGTCCAATCTCGGGGAAGATCTAGGCAAGCTAACTCCCAATTTATTGTGATGTTGGAGAGGGGAAACATGAATCAAAGAAATCAACTTTTTGACATCATCAGGAGTGAGCGATCAATGACTGAAGCAGCTATTTATAAAGAACACGATGCTTCTAGTTTAAGGGTGATTACACAAGGGAAAACAGATGCATACTATGTGGAGTCTACTGGAGCATCAGTGACTTTGGACTCTAGTGTTAGCCTTTTAAATCGATATTGTGAGAAGTTACCATGTGATGAGTACTCCCGTGCAAAGCCCACTTTTGAGTTCCTACCTATGGAAGGGTGTTACAAGTGTACATTAACATTACCGCCTAATGCAGCTTTCCAAACAATAGTTGGTCCCTCAGGAAAAGATGTTCGTTTGGCAAGGCATCTTGTTTGCTTAGAAGCTTGTAAGAAGCTGCATCAAATGGGCGCCTTAAATGATCATCTTGTCCCATTCACAGAAGAGCCTTCAGAGGCTGAACTTAGAGTGAAAAACAAAGGATCAAGTTCAGGTGCAGGAACCACAAAGAGAAAGGAGTTACATGGCACAGCCAGCATTCACGCATTATGTGGTACATTGGAAGACAAGCTTGACGGAGCCAAATTTCATGCCTATAGTTTTGATTTCACATGTAATATTGTCAGTGAAATTTACTCAGGATTTGTTCTCCTGATTGAGTCAAAGCTTGACGATGATGTTGGAAATATTGAATTAGATCTTTATTTGATCTCAAAATTTGTGAAGGCTTCCATATCTTCCTGTGGGCAAGTTAATTTGAATGCTGAACAGATGATGAATGCAAAACGCTTTCATGAGCTCTTTTTCAATGGTTTGTTTGGGAGATTGGTTCTTTGGTCCAAGTCAATAAAAGGACAAAGGGAGTTTTTACTTCAGGAAGATACAGCATCACTGTGGAGCCCAAAAAACTTTTATCTGCTTCTGCCACTTGAGCAATTGAATTATAGTAAGGGGTCCATGAAAATAAATTGGTCTGCAATAAATTCTTGTGCTTCTGCTGTTGATTTTTTAAGGAAGAAGTTTTCATTGGCTGCTGGAGATTGTGATGATGACAGAAAAATCACATCACCTTGTCCTTGTGATACCGATTCTTCACAGGTGGAATGTGAGGGCACAAATAAGATTCATTTTGCTAATTGTGGGGTTGATGTTAATAATATAAAGAATAGGGTAGTTTTGGCTACTCACACCGGGAGGATATACTGTATTCTCGAAGCCGACAATAACCTATCTGCCGAAAGTCCCTTCGATGGAAACAGTGAAAAGTCTCCCGGGGAACACATTACCTTCTCTGGTTACTACAAGAAAAGGTATGGGATTACACTGAGACATCCGGGACAGCCTTTGTTACGTTTGAAGCAAAGTCACAATGCTCACAATCTTCTTTTGAATTTCCATGAGGAAGATGATAAGGAAAAGTCATCACAAATTGACCCAGTAAACACAAAAATGCCTGCAAATGTTCACATTCCACCTGAGCTTCTATGTGTTCTTGATGTTAAAAGAGATGTTTTGAAGTCGATGTACTTGCTACCATCATTGATGCATCATCTTGAATGCCTCATGTTGTCCAGTCAGCTTAGAGAAGAGATAGATGGTCAGACTAGCAATTTCAACATACCTAGCTCTCTGATTCTAGAAGCATTGACAACTTTAAGATGTTGTGAAAAATTTTCAATGGAACGTCTTGAGTTGCTTGGAGATTCTGTTCTGAAATATGCTGTGAGCTGTCACCTTTTTCTTAAGTATCCTAAGAAACATGAAGGACTATTATCTGCCAGACGGTCATGGGCTGTTTGTAATTCAACCCTGCATAAACTGGGAACAGATCGCAAATTACAGGGATATATCCGAGACTCTGCGTTTGAACCACGCCGTTGGGTTGCCCCAGGACAGCGCTCTATACATGCTGTTCATTGCGAATGTGGGTTGGAATCCCTAGAAGTGCCTGTTGATGGAAAATTCCATACTGAAGATCCAAAAGTTGTGGTTGGGAAGTTCTGTGATAGGGGTCACCGCTGGATGTGTTCAAAGACAATTTCTGATTGTGTTGAAGCTCTAATAGGAGCATACTATGTGGGTGGTGGACTGATTGCTTCACTACATGTGATGAAGTGGCTTGGGATTGATGCTGAACTAGAGCCATCCTTGATTGATGAAGCCATCACTGCTGCATCTCTCCATACATATGTACCAAAAGTAAAAGAGATTGCAAGCCTTGAGAAGAAAATTAAGTATGAATTTTCTGTTAAGGGTCTCTTATTGGAGGCAATCACACATTTGTCAGAGGCAGAACTGGGGATTGGCTGCTGTTACGAGAGACTGGAATTTCTTGGTGACTCCGTGTTAGATCTTCTCATAACATGGCATCTGTATAAGAGCTACCAAGATATTGATCCAGGGGAGTTGACTGACTTGCGTTCTGCTTCTGTCAATAATGATAGTTTTGCTCAAGTTGCTGTTAGAAGAGACCTTTATCTGCACCTTCAGCATAGCTCAGGAATATTGCTAGGCCAGATATTGGAATATGTGACAATAATTTCTGAATCAGAGAGCAACACCAGATCACGGCCAGGCATTAAAGCTCCCAAGGCACTTGGAGATCTAGTGGAAAGTATTGCTGGGGCTATACTAATTGATACCAGGCTCAATCTTGACGAAGTGTGGAAAGTTTTTAATCCTCTGTTATCTCCCATTGTTACTCCTGACAAACTTGAATTGCCTCCATTGCGTGAACTAATTGAATTATGTGACTCTCTTGGGTATTTTATTAAAGAAAATTGTAAAAAGAAGGGAACTATGGTGCATGCTGAGCTTAGTGTACAGCTGCCAAATGCCCTCTTGGTTAAAGAGGGAAAGGGGCTAAATAAAAAAATAGCAAAAGGAGAAGCCGCATTTCATTTGTTGAAGGAACTTGAGAAGAGGGGAATTTCATATGGTGGTAGCATGTCGAAGAGAAAAAGAGAGAATCCTGACTATCTCCGTGATTCATCTCATCTCGAAACAGATGTTAGTCATTGCCAGAGTCTAACAAATGAACATTTGTCAAAGCCAGCACATAAAAGGCCAAAAGTGGATGAAATTAACATAACCGGAAGTGCATCTGCCATTTTGTTGCCTCACAAGGACTCTTCCAGGGAAGTCTCTGATTCTACTGCTTCCATTCCAGTTCTGGCATCTATTAATATGAAGAAGGGAGGACCCCGAACCACACTATATGAACTGTGCAAGAAATTACAGTGGCCATTGCCTGCATTTGATTCAACAGAATATAAAGATAGAACCCTTTTCGAATCCTGCGAAGGCCTGGAAGGAAGCAAGGGACTTAATTGTTTTGTGTCAAAAATTACCTTGTGCATACCAAATGATGGTAATATAGAATGCAAAGGAGAACCTAGAGCTGATAAGAAGAGCTCATTTGACTCTGCCGCAGTTCAAATGCTTAATGAGCTGCAACGACTGGGAAAACTTAAGATTGGTGGTGACCCCTAA | 4221 | 0.4023 | MVHCCLNCKAQSNATIRMWTTKLKTLHKRMSNELAKVLYCLEDLGLLCAYEAVKIWHENFSKVEGECEVYRKAYLHCKVFIDEVIQTIQESLHLDDSKILEVQFDFSKAVNLGYLSPKLLELIKLIQSFGDSCKVLCLVFVERIITAKVIERFIKKVPQISHFTVSYLTGNSTSVDALTPKRQKEILDSFRSGKVNILFTTDVIEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQFIVMLERGNMNQRNQLFDIIRSERSMTEAAIYKEHDASSLRVITQGKTDAYYVESTGASVTLDSSVSLLNRYCEKLPCDEYSRAKPTFEFLPMEGCYKCTLTLPPNAAFQTIVGPSGKDVRLARHLVCLEACKKLHQMGALNDHLVPFTEEPSEAELRVKNKGSSSGAGTTKRKELHGTASIHALCGTLEDKLDGAKFHAYSFDFTCNIVSEIYSGFVLLIESKLDDDVGNIELDLYLISKFVKASISSCGQVNLNAEQMMNAKRFHELFFNGLFGRLVLWSKSIKGQREFLLQEDTASLWSPKNFYLLLPLEQLNYSKGSMKINWSAINSCASAVDFLRKKFSLAAGDCDDDRKITSPCPCDTDSSQVECEGTNKIHFANCGVDVNNIKNRVVLATHTGRIYCILEADNNLSAESPFDGNSEKSPGEHITFSGYYKKRYGITLRHPGQPLLRLKQSHNAHNLLLNFHEEDDKEKSSQIDPVNTKMPANVHIPPELLCVLDVKRDVLKSMYLLPSLMHHLECLMLSSQLREEIDGQTSNFNIPSSLILEALTTLRCCEKFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGLLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFEPRRWVAPGQRSIHAVHCECGLESLEVPVDGKFHTEDPKVVVGKFCDRGHRWMCSKTISDCVEALIGAYYVGGGLIASLHVMKWLGIDAELEPSLIDEAITAASLHTYVPKVKEIASLEKKIKYEFSVKGLLLEAITHLSEAELGIGCCYERLEFLGDSVLDLLITWHLYKSYQDIDPGELTDLRSASVNNDSFAQVAVRRDLYLHLQHSSGILLGQILEYVTIISESESNTRSRPGIKAPKALGDLVESIAGAILIDTRLNLDEVWKVFNPLLSPIVTPDKLELPPLRELIELCDSLGYFIKENCKKKGTMVHAELSVQLPNALLVKEGKGLNKKIAKGEAAFHLLKELEKRGISYGGSMSKRKRENPDYLRDSSHLETDVSHCQSLTNEHLSKPAHKRPKVDEINITGSASAILLPHKDSSREVSDSTASIPVLASINMKKGGPRTTLYELCKKLQWPLPAFDSTEYKDRTLFESCEGLEGSKGLNCFVSKITLCIPNDGNIECKGEPRADKKSSFDSAAVQMLNELQRLGKLKIGGDP* | 1407 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g1911 | 1406 | Pfam | Helicase conserved C-terminal domain | 136 | 235 | IPR001650 | - | |
Dod09g1911 | 1406 | ProSiteProfiles | Ribonuclease III family domain profile. | 767 | 939 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | SMART | PAZ_2_a_3 | 592 | 766 | IPR003100 | GO:0005515 | |
Dod09g1911 | 1406 | CDD | RIBOc | 786 | 950 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | SUPERFAMILY | RNase III domain-like | 780 | 957 | IPR036389 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | CDD | RIBOc | 996 | 1146 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | Gene3D | Dicer dimerisation domain | 301 | 399 | IPR038248 | - | |
Dod09g1911 | 1406 | PANTHER | DICER-RELATED | 16 | 1399 | - | - | |
Dod09g1911 | 1406 | ProSiteProfiles | Ribonuclease III family domain profile. | 980 | 1125 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 118 | 252 | IPR027417 | - | |
Dod09g1911 | 1406 | Gene3D | - | 111 | 273 | IPR027417 | - | |
Dod09g1911 | 1406 | SUPERFAMILY | RNase III domain-like | 979 | 1145 | IPR036389 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | Pfam | PAZ domain | 628 | 763 | IPR003100 | GO:0005515 | |
Dod09g1911 | 1406 | ProSiteProfiles | Double stranded RNA-binding domain (dsRBD) profile. | 1194 | 1217 | IPR014720 | - | |
Dod09g1911 | 1406 | Pfam | Ribonuclease III domain | 1016 | 1124 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | Pfam | Ribonuclease III domain | 804 | 938 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | PANTHER | ENDORIBONUCLEASE DICER HOMOLOG 3 | 16 | 1399 | - | - | |
Dod09g1911 | 1406 | SMART | riboneu5 | 786 | 959 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | SMART | riboneu5 | 995 | 1148 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 118 | 279 | IPR001650 | - | |
Dod09g1911 | 1406 | Gene3D | Ribonuclease III domain | 968 | 1145 | IPR036389 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | Gene3D | Ribonuclease III domain | 768 | 950 | IPR036389 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | Gene3D | paz domain | 614 | 740 | - | - | |
Dod09g1911 | 1406 | ProSitePatterns | Ribonuclease III family signature. | 1016 | 1024 | IPR000999 | GO:0004525|GO:0006396 | |
Dod09g1911 | 1406 | Pfam | Dicer dimerisation domain | 306 | 392 | - | - | |
Dod09g1911 | 1406 | ProSiteProfiles | Dicer double-stranded RNA-binding fold domain profile. | 306 | 396 | IPR005034 | GO:0016891 | |
Dod09g1911 | 1406 | SUPERFAMILY | PAZ domain | 628 | 742 | IPR036085 | GO:0005515 | |
Dod09g1911 | 1406 | Gene3D | - | 1317 | 1396 | - | - | |
Dod09g1911 | 1406 | CDD | SF2_C_dicer | 114 | 246 | - | - | |
Dod09g1911 | 1406 | ProSiteProfiles | PAZ domain profile. | 629 | 742 | IPR003100 | GO:0005515 | |
Dod09g1911 | 1406 | SMART | helicmild6 | 148 | 238 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g1911 | Dod-Chr9 | 40685739 | 40696541 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod09g1911 | 162 | 235 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 38.667 | 3.17e-07 | 52.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod09g1911 | K11592 | - | gmx:100806831 | 2061.57 |