Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1910 ATGGGTGGTGATGGCAGAGTTGAAGTTGTGAGTAGCAAAGGGTGCTCAAGGCTGTTTTCATCTTCATTCAGAGCTTTGCAATTGCAACCATTGGAGCCAATGTCTCCTGTTTCGTCCTCTGTGCAAGTGCGATCAAATGCTCCTTTCGCTGGTCTCATTATATGCGTTACTGGTCTATCTAAAGAAGCAAGGAATCAGGTCATGGAGGCAACAGAAAGATTAGGTGGCCAGTATAGCCCCAATTTGCATCCACAATGTACCCATTTGGTGGTTCAGAGCTTTGGTGGACGCAAGTTTGAGCATGGCCTGAAGCATGGAGCAAAAAATGGTCTCTTTGTTGTCACATTGGGTTGGTTTGTGGATAGTGTCAAGAAAAATGTGAGGTTGAGTGAATCACATTACAGTGTGAAGAATTATGTGGACAACAATATGCACTTGGATGATTTTAAACTACTTCCTGGGTATGCAAATGCTGAAAATTCTTGTCTTCCAGCTAAAATCCGTGAAACCAAGCATGTTGATAATGTTGAAGAATTTCAAACATTTTCTGGTAGAGAATCTACCAGAAGTTCGGACTTTACTTTTTCTGGTTGCTCCATCTATGTTGATCCAGGAATTTCATCTGAATTGAGGGACAAGGTTGTTGAGACTGCCACAAGAGAAGGTGCTAGTTTGGTGGAACGATGGTTTGTTGGCTGCAACGTTAGTCATGTAGTGACTGAGGGGACATCCATCCAAAGATATCTTGGATACTCGAGTAACCTCATTACACCGCTGTGGATTCTCAAAACAGCTAAGGAGAAATATATGCAAAGGCTTGTTCACATGTCTGCTGATTTGGCCAGGCAAGTTGGCTTGATTCTTGAAGACATTCATAATGGTATTTCAGGGAAGGAAGTAATAAAGCAAAAAGCCCGTCACAATCATGAGGGTAGTGAAAGTGAAGTTAGTTACAATGAAAGGCAACAAATTGTGAATACTGCAAAAATTGGTGTAAGAAGTCGCCGTGGCAGGCGAATGCAGACTTGTCAGACTCCAATACGTCCTATAACACCCAACAACCTTCTAGACTCTATTTGTTGGTCAATATCTGAGCCAACTTCAGCTGCTTCCATTTACACAGACTCTTTCAGTGTAGAAGATCCTACTGAAAATCATACTTCAATCTTCTTTGATGCTAAAGGAGATGGCAAGGATTCAGAACCTTCATTTTTAAACTCCACTCGTCCTCTTACCGAAAGTGAGAAATCTGAGTTGATATTTAGAAACCATTTTCTCACCATACTCTTTCCAATTGACCGATTTTCCGAGATGGGTCCTTCTTCAAGAACGTTTTTCGGCCACAATGGCTTTACGTGTCTTCAGGTGTTGGATCATATCCATGCATTTTATCAGGAGAATATGTCAAGCCAGGAAATAGAAGCTGCAATTCATACTGATTCAAGACATGCTGATAGGCTCAGATCAGTGTATTGTAGTAAAGAAACAGCAGAGCGTGGCTATGTGATGTTCAGGCGGATTGAGTTCCTGGGTAGTCGCACAAGTTTTGAAATGTTGAAGCGTGTTACTGGGGACAACAACTCCAACGTGTATGAGCTATTACTCAGGGCATGA 1614 0.4195 MGGDGRVEVVSSKGCSRLFSSSFRALQLQPLEPMSPVSSSVQVRSNAPFAGLIICVTGLSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQSFGGRKFEHGLKHGAKNGLFVVTLGWFVDSVKKNVRLSESHYSVKNYVDNNMHLDDFKLLPGYANAENSCLPAKIRETKHVDNVEEFQTFSGRESTRSSDFTFSGCSIYVDPGISSELRDKVVETATREGASLVERWFVGCNVSHVVTEGTSIQRYLGYSSNLITPLWILKTAKEKYMQRLVHMSADLARQVGLILEDIHNGISGKEVIKQKARHNHEGSESEVSYNERQQIVNTAKIGVRSRRGRRMQTCQTPIRPITPNNLLDSICWSISEPTSAASIYTDSFSVEDPTENHTSIFFDAKGDGKDSEPSFLNSTRPLTESEKSELIFRNHFLTILFPIDRFSEMGPSSRTFFGHNGFTCLQVLDHIHAFYQENMSSQEIEAAIHTDSRHADRLRSVYCSKETAERGYVMFRRIEFLGSRTSFEMLKRVTGDNNSNVYELLLRA* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1910 537 SUPERFAMILY BRCT domain 194 270 IPR036420 -
Dod09g1910 537 ProSiteProfiles BRCT domain profile. 190 268 IPR001357 -
Dod09g1910 537 Gene3D BRCT domain 47 138 IPR036420 -
Dod09g1910 537 SUPERFAMILY BRCT domain 46 137 IPR036420 -
Dod09g1910 537 SMART BRCT_7 46 126 IPR001357 -
Dod09g1910 537 SMART BRCT_7 192 268 IPR001357 -
Dod09g1910 537 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 537 - -
Dod09g1910 537 CDD BRCT_TopBP1_rpt2_like 48 126 - -
Dod09g1910 537 Pfam Family of unknown function (DUF6699) 361 521 IPR046522 -
Dod09g1910 537 ProSiteProfiles BRCT domain profile. 44 136 IPR001357 -
Dod09g1910 537 Pfam twin BRCT domain 52 118 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1910 48 136 Core DNA Replication Machinery Family AT1G77320 37.079 1.48e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1910 - - gmx:100815253 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1910 09 40679715 40685027 Dod09g1910 09 40679715 40685027 ECH