Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1894 ATGGTTGTGTCTCCTTGCACACAATACCACTTTCGTATTTTACATATGGAGTTGGATCCTGAAGATATTATTTCAACATTACCTGCTGTATTCTACAGAAAATATCGACAAGAGCTAGGTACACAACTGACATTCATAGACTATCAAGGCAATGTTTTTGTTGTTATATTGGAGAAGGGACTGCGAACTGGTTACATTGTTGGTGGTCTGAAGGAGTTAATGGAGTTTTACAATATTGAAGTTGGTGGTTGGCTGAAACTTTGGTATGCAGGTGGCAACATGTTTTACATCAAGGTGAAGGATGGAAACATGTCTCCAGTCACATACTCTCATTGTGCTACCGAAGTAGTTGGAGATGTCATGCTGCCATTTTTATCAAGTTCATTTGTGAGCCCTGATGAAGAAAGCCATCAGTCCATAGTTCATAATGGTTTTTCCTGTGATAATGTTGTCTTTCAATCTACCTCTCACCCTGTTGAACAATCTGGAACTAATTTTGCTGATTTAATTGATAGTCCTGCTTTTTTGTGTCATACAATCCCTAATAAGATGATTGAAAATTTGGATAGTTCTGAAGTTGGTCTTCAATTTGAATTAAACAATTTCATCCACCCTATGGATAGACCTATGCATGAAGTTGATCTTGGTGTGAACTACGGACATTTATCTCAGATGGATGATGTATTTTATTGTGATGAGCCTTCGTTCATTGATTATCCTCCTCAGATTGATGAAGAAGTGAATTCATTGGCTGCGGTTCTTGGTTATGTTGGTATAGATGGGGAACCTCCAAATGAAGATCTTATGGATGTTGGTGGTGATTATCAGGCACAAGTGGATGCAGTTGATATTGGGGTTGTACAGCATGATGATAAACTTAATGGTGGTGGTGAGGCATTTATAGGTCGCCAGCCTATTGCTACTGTTGTCTGTGAAAAACACATCACTGCCTACCAATCACAGAGTCATTCATTGGGCCTTCCTGCTGCATTCGTGGTTCAAGCTTTTCCTAGCAGACCTACTTCTTTGGTGGTAAGAGATGATAATGGAATGACATATGATATGGAATTGCGTTGGGGTACAAAGAGATTGACAGAAGCATATTTGACTAAGGGTTGGAAGCAGTTTGCTGTGGACCACCATCTTACGGATGGAAGTGTGGTTATCTTTAGGGTGTTTGCAGATAACGAGCAGGTTGTAATTGCTAATGTTCTTAATGATTGA 1224 0.3946 MVVSPCTQYHFRILHMELDPEDIISTLPAVFYRKYRQELGTQLTFIDYQGNVFVVILEKGLRTGYIVGGLKELMEFYNIEVGGWLKLWYAGGNMFYIKVKDGNMSPVTYSHCATEVVGDVMLPFLSSSFVSPDEESHQSIVHNGFSCDNVVFQSTSHPVEQSGTNFADLIDSPAFLCHTIPNKMIENLDSSEVGLQFELNNFIHPMDRPMHEVDLGVNYGHLSQMDDVFYCDEPSFIDYPPQIDEEVNSLAAVLGYVGIDGEPPNEDLMDVGGDYQAQVDAVDIGVVQHDDKLNGGGEAFIGRQPIATVVCEKHITAYQSQSHSLGLPAAFVVQAFPSRPTSLVVRDDNGMTYDMELRWGTKRLTEAYLTKGWKQFAVDHHLTDGSVVIFRVFADNEQVVIANVLND* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1894 407 ProSiteProfiles B3 DNA-binding domain profile. 310 407 IPR003340 GO:0003677
Dod09g1894 407 Gene3D - 310 404 IPR015300 -
Dod09g1894 407 SUPERFAMILY DNA-binding pseudobarrel domain 312 401 IPR015300 -
Dod09g1894 407 SUPERFAMILY DNA-binding pseudobarrel domain 24 101 IPR015300 -
Dod09g1894 407 CDD B3_DNA 320 391 IPR003340 GO:0003677
Dod09g1894 407 SMART B3_2 311 406 IPR003340 GO:0003677
Dod09g1894 407 Pfam B3 DNA binding domain 314 397 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1894 Dod-Chr9 40487995 40490176 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dod09g1894 B3 2.6e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1894 - - adu:107495480 128.642