Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1862 ATGGAAACAACATGCGTGGATACTTCTCTCAACCTCAACGTTATTCCTCCTAACAACATCGACGTTGCGGCTGAGGTTTTGGTTGAAGAGTTGCATCGCCTAAGTTGTGAGAATAAGAAGCTAACCGAGACACTGAATGAGGTGTGTGAGAACTATCTTGCTTTGCAGAGGAATTTGAGCCAATTTAGCCAACTCAAGAACGAGAATCTTGAGAACAAAGCAACACCATCGCGGAAGAGAAAGGCCGAGAGTGAGAGCTGTATCAGTAATATGTTTGGTATGAGTACTGCGTATACTGAGTGCAGTACCACTACTGAGGATGAGACAATATTTTTCAAAAGGCCCAGGCATCATGACACCCCGCCAAAGGTTTCCAAGGTTCTTGTACGGACAGATGCATCTGATACTAGCTTATATGTGAGGGATGGATATCAGTGGAGAAAATACGGCCAAAAAGTCACCAGAGATAACCCCTCTCCTAGGGCTTACTTCAAGTGTTCCTTTGCCCCAAACTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGCAGAAGACCCAACTTTATTGGTGGCAACATACGAAGGAGAGCACAACCATGGGCATCACAACCAAGGGGAAGTACCACTGACGAGTTCATCAAGCCAAAGTGAAAGCCCTCCTGCAGTGTCAGCTCCTCCTGCACTCATCATGAATATGAATCGGATGAGTACTGCTAGTGCTGGAGGTCCAAGTCCAACTGCTGTGACGCTTGACTTGGTCCAGTCGGGGTTAGTTGACAATGCACAAAAGTCTTCAATCCAGCAGTTTTTAGTTCAGCAGATGGCTACTTCTTTGACCAAAGATCCCAATTTTACTGCCGCACTTGCTACCGCCATTTCAGGAAGAATTCTAGACCAGACATCATCTATGAACAGCCGGTGA 918 0.4619 METTCVDTSLNLNVIPPNNIDVAAEVLVEELHRLSCENKKLTETLNEVCENYLALQRNLSQFSQLKNENLENKATPSRKRKAESESCISNMFGMSTAYTECSTTTEDETIFFKRPRHHDTPPKVSKVLVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPNCPVKKKVQRSAEDPTLLVATYEGEHNHGHHNQGEVPLTSSSSQSESPPAVSAPPALIMNMNRMSTASAGGPSPTAVTLDLVQSGLVDNAQKSSIQQFLVQQMATSLTKDPNFTAALATAISGRILDQTSSMNSR* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1862 305 Gene3D WRKY domain 124 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1862 305 SUPERFAMILY WRKY DNA-binding domain 137 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1862 305 ProSiteProfiles WRKY domain profile. 142 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1862 305 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 298 - -
Dod09g1862 305 MobiDBLite consensus disorder prediction 203 220 - -
Dod09g1862 305 Pfam WRKY DNA -binding domain 142 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1862 305 MobiDBLite consensus disorder prediction 196 222 - -
Dod09g1862 305 SMART WRKY_cls 140 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1862 305 Coils Coil 24 58 - -
Dod09g1862 305 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 298 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1862 Dod-Chr9 40261955 40264273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1862 3 298 WRKY Transcription Factor Family AT1G80840 42.903 3.09e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod09g1862 WRKY 8.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1862 - - gmx:100127373 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1862 09 40261955 40264273 Dod09g1862 09 40261955 40264273 ECH
Dod08g1753 08 41745377 41747511 Dod09g1862 09 40261955 40264273 PCT