Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1858 ATGGCAAAGTGTCACCAAAACGACGTCGGATCCCTCGTTCTCGACCACCACCACCCTCCCAAGAATGCCGCCTCCGGCGGCCACTTCCGCCTCTGGAACTCCCTCTCCGCCTCCTCCTTCCGCCGCATCGTCGTCGACGCTGTCAGCTGCGGCGGCACCTCTCGCTACCGTTACAAGCATCGCCAAGGTGACGACGACGAAGAAGGATTCAGCTCCGCCAATGCCTCGACGGCAAGCCTGGCCTCCGGCAGCCGGAGGGAGAAGCAGCAGCAAGAGCAGAGGACGACGGAGAAGCTCTTGGATCTGCTGAACATAGCGGAGTTCCAGACGGAGGCGGAGGCGAAGAAGAAGGAAGAGGCGTTGGTGGAGCTGAAGAAAGTGGTGAAGGATTTGCAGGGAGAGGACTCGACGAAGCGGCGAACGGCGGCGACGAGAGTGAGGTCTCTGGCGAAGGAAGGATCGGAAGCGAGAGGAACACTCGCGATGCTCGGAGCAATTCCTCCACTGGTCGGAATGCTCGATTCGGATGAGGACGTTCATTCTCAGATCGCTTCGCTCTACGCATTGCTCAATCTCGGGATCGGCAACGATGCAAATAAAGCAGCCGTTGTCAAAGTTGGTGCTGTTCACAAGATGCTGAAGCTCGTTGAATCGCCGGATGCTACAGATTCATCTGTGTCTGAAGCAATTGTTGCTAATTTCCTTGGATTGAGTGCTTTGGATTTGAACAAACCAATAATTGGATCCTCTGGTGCAATTCCATTCCTCGTTAGAACCCTAAAAGAGTTAGATTGTAAATGTAGCAACCAAGCCAAGCAAGATGCTCTCCGAGCTCTGTACAATCTCTCAATCTTTCCAACCAACATTTCATTCGTTTTGGAAACTGATTTGGTTTTGTTTCTCATAAATGCAATTGGAGACATGGGAGTGAGTGAGAGGGTGCTTTCAGTCCTAAGCAATTTGGTGTCAACCCCAGAAGGTAGAAAAGCTATCAGTGCTGTGAAGGATGCGATCCCAATTCTGGTTGATGTGTTGAATTGGACTGATTCGCCAGCATGCCAAGAGAAGGCATCGTACATTGTGATGATTATGGCACACAAAGTCTATGGTGAGAGGCAGGCCATGATTGAGGCAGGGATTATGTCATCACTGCTTGAGTTGACCCTTCTGGGTACCACATTGGCACAGAAAAGGGCCTCAAGGATATTGGAGTGTTTGAGGATAGACAAAGGGAAGCAGGTTTCTGGGAGCTACGGTGGTAACTTGGGTGCCAATGTATCTGCACCTATTTGTGGCTCTTCATCATCTTTTACAAAGTCAGGTGGAGGAGGTAAAGAGTGTTTGGAGGAGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTGGTCCAGCAGAGTTTGCAGAACAACATGAGGAAAATTGTCAAAAGGGCCAACTTGCGTCAAGATTTTGTTCCATCCGAGCATTTTGCTTCACTCACTTCAAGTTCAACTTCGAAGAGCCTGCCATTTTGA 1524 0.5033 MAKCHQNDVGSLVLDHHHPPKNAASGGHFRLWNSLSASSFRRIVVDAVSCGGTSRYRYKHRQGDDDEEGFSSANASTASLASGSRREKQQQEQRTTEKLLDLLNIAEFQTEAEAKKKEEALVELKKVVKDLQGEDSTKRRTAATRVRSLAKEGSEARGTLAMLGAIPPLVGMLDSDEDVHSQIASLYALLNLGIGNDANKAAVVKVGAVHKMLKLVESPDATDSSVSEAIVANFLGLSALDLNKPIIGSSGAIPFLVRTLKELDCKCSNQAKQDALRALYNLSIFPTNISFVLETDLVLFLINAIGDMGVSERVLSVLSNLVSTPEGRKAISAVKDAIPILVDVLNWTDSPACQEKASYIVMIMAHKVYGERQAMIEAGIMSSLLELTLLGTTLAQKRASRILECLRIDKGKQVSGSYGGNLGANVSAPICGSSSSFTKSGGGGKECLEEEEDMMSEEKKAVKQLVQQSLQNNMRKIVKRANLRQDFVPSEHFASLTSSSTSKSLPF* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1858 507 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 507 - -
Dod09g1858 507 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 507 - -
Dod09g1858 507 Coils Coil 114 134 - -
Dod09g1858 507 Gene3D - 120 407 IPR011989 -
Dod09g1858 507 Coils Coil 445 468 - -
Dod09g1858 507 SMART arm_5 285 323 IPR000225 GO:0005515
Dod09g1858 507 SMART arm_5 324 366 IPR000225 GO:0005515
Dod09g1858 507 SMART arm_5 240 284 IPR000225 GO:0005515
Dod09g1858 507 SMART arm_5 196 239 IPR000225 GO:0005515
Dod09g1858 507 SMART arm_5 153 194 IPR000225 GO:0005515
Dod09g1858 507 MobiDBLite consensus disorder prediction 56 95 - -
Dod09g1858 507 SUPERFAMILY ARM repeat 123 409 IPR016024 -
Dod09g1858 507 MobiDBLite consensus disorder prediction 69 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1858 Dod-Chr9 40196605 40198317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1858 105 404 U-box Gene Family AT3G46510 33.443 2.20e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1858 - - gmx:100796229 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1858 09 40196605 40198317 Dod09g1858 09 40196605 40198317 ECH
Dod08g1733 08 41218285 41221667 Dod09g1858 09 40196605 40198317 PCT