Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1848 ATGAACCTTGTTCCTATGATTCTCTTGCAGCTTCTCATTCTTCACCAACCCTTTTGGGTTCACGTTGCTGCTGTAGACCCTCCTGTTCCCCAACCCATTGATCCATTTTCCACCTCCAATTCCCTCCATGCTTTCCCACCTGGAATTCAGGTGGGGGAAGAAAAGCAGCGAAGTGATTCGCACAAGAAAGTGGTAATAGCTCTGGTCGTAGCCGCCGCTTCACTTGGTGCAGCAATCTTGAGTTTGCTATGCTTCTGGATTTATCGTAGAAAGTATCCATCAAAACCAAATAGGAAAAATAAAAATGTCCAAAGCTCAGATACAGAGAAAGGGCTCACGGTGGCAACATTTTTCAGTAAATACAGTGCCATCAAGACGGTTGGTATGAAGGGGTGTGTTCCAATAATCGATTATAAGCAAATTGAGAAAGCGACCAACAATTTTGAGGAAAGTAACATCTTGGGTGAGGGGGGTTTTGGATGTGTTTACAAGGCTCGTTTGGATCATGATAACCTCGTTGTTGCCGTCAAGAAATTACATTGTCAGAGTCAAAATGCTGAGAGAGAATTTGAGAACGAGGTGGAATTGTTGAGCAAAATTCAGCATCCAAATATAATTTCTCTACTAGGTTGTAGCATTAATGGCGACACGAGATTCATCGTCTATGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGACCTCCTCGTGGCTCGGCGTTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAATATCTGCATGAGCACTGTTACCCTTCGGTGATCCATAGAGATATGAAATCTTCTAATATCCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGCCTTGCTATAACTGATGGGACCCAAAACAAGAAGAACATCAAGCTTTCAGGCACATTGGGGTACGTTGCCCCGGAGTATCTTCTTGATGGAAAATTGACTGATAAAAGCGATGTATATGCTTTTGGAGTTGTGCTTCTGGAGCTCCTATTAGGAAGGCAGCCTGTGGAAAAACTGGCACCAGCCCAGTGCCAATCCATCGTCACATGGGCCATGCCACAACTCACTGACCGATCCAAACTTCCAAACATTGTGGATCCGGTGATTAAGGATACAATGGATCTGAAGCACTTATACCAGGTTGCTGCTGTAGCTGTGTTGTGCGTGCAACCAGAGCCAAGTTACCGTCCGCTAATCACAGATGTTCTCCACTCACTTATTCCTCTTGTTCCCATTGAGCTTGGAGGAACGCTCAGAGTTTCACAGGTGAACTGA 1314 0.4437 MNLVPMILLQLLILHQPFWVHVAAVDPPVPQPIDPFSTSNSLHAFPPGIQVGEEKQRSDSHKKVVIALVVAAASLGAAILSLLCFWIYRRKYPSKPNRKNKNVQSSDTEKGLTVATFFSKYSAIKTVGMKGCVPIIDYKQIEKATNNFEESNILGEGGFGCVYKARLDHDNLVVAVKKLHCQSQNAEREFENEVELLSKIQHPNIISLLGCSINGDTRFIVYELMQNGSLEAQLHGPPRGSALTWHMRMKIALDTARGLEYLHEHCYPSVIHRDMKSSNILLDANFNAKLSDFGLAITDGTQNKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRQPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKDTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRVSQVN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1848 437 CDD STKc_IRAK 154 422 - -
Dod09g1848 437 ProSitePatterns Protein kinases ATP-binding region signature. 154 178 IPR017441 GO:0005524
Dod09g1848 437 ProSiteProfiles Protein kinase domain profile. 148 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1848 437 PANTHER BNAA04G14780D PROTEIN 30 435 - -
Dod09g1848 437 SUPERFAMILY Protein kinase-like (PK-like) 129 419 IPR011009 -
Dod09g1848 437 Gene3D Phosphorylase Kinase; domain 1 110 224 - -
Dod09g1848 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Dod09g1848 437 Gene3D Transferase(Phosphotransferase) domain 1 225 424 - -
Dod09g1848 437 Pfam Protein kinase domain 148 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1848 437 SMART serkin_6 148 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1848 437 PANTHER OS01G0750732 PROTEIN 30 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1848 Dod-Chr9 40072795 40075763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1848 20 365 Receptor kinase-like Gene Family AT1G80640 47.851 7.75e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Dod09g1848 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1848 - - gmx:100812044 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1848 09 40072795 40075763 Dod09g1848 09 40072795 40075763 ECH
Dod08g1720 08 40925658 40930383 Dod09g1848 09 40072795 40075763 PCT