Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1834 ATGATGACACATGATGGAAGCGTCAACCTTCCTCCAGGGTTTCTCTTCTCTCCAACGGATGAAGAACTCGTCCTTCACTTTCTCTATTCTAAGGCTTCTCTTCTTCCATGCCACCCCAACATCATCCCTGATCTCGATCTCTCTCTCACCGATCCCTGGGAATTAAAGGGTAAGGCTTTGTCAAGTGGGAATCAATACTATTTCTTCACCAAATTGGAAGAAAACAGAGCCACGGAAGATGGGTATTGGAAGGAAATAGGTGTCACCGAACCTATAGTGTCAGATGTTGACAAGGAAGTGGGGATGAAGAAGTACCTGGTATTCCACATTGGAGAAGCTCCACAAGGTAGTGAAACCAACTGGGTAATGCAAGAATATCATATCTGGTCGTCTGGATTCGACACTGCATCACATCGGTGTGCTAGGGGAAGACGAAAACACGATCAAAGTCGGAGCAGATGGGTTTTGTGCAGAGTGTATGAAAAGAATAGCTCTCAACAAGGTGTAAACTGCAATAGCGATCATGATGACGACAGTGGATCAGAGCTTTCATGGCTAGACGAAGTTTATCTGTCGTTGGATGATGATCTAGAGGAAATAAGCATGTCTAATTAA 615 0.4439 MMTHDGSVNLPPGFLFSPTDEELVLHFLYSKASLLPCHPNIIPDLDLSLTDPWELKGKALSSGNQYYFFTKLEENRATEDGYWKEIGVTEPIVSDVDKEVGMKKYLVFHIGEAPQGSETNWVMQEYHIWSSGFDTASHRCARGRRKHDQSRSRWVLCRVYEKNSSQQGVNCNSDHDDDSGSELSWLDEVYLSLDDDLEEISMSN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1834 204 PANTHER NAC TRANSCRIPTION FACTOR 56 3 201 - -
Dod09g1834 204 Gene3D NAC domain 19 167 IPR036093 GO:0003677|GO:0006355
Dod09g1834 204 Pfam No apical meristem (NAM) protein 11 128 IPR003441 GO:0003677|GO:0006355
Dod09g1834 204 ProSiteProfiles NAC domain profile. 10 162 IPR003441 GO:0003677|GO:0006355
Dod09g1834 204 SUPERFAMILY NAC domain 4 162 IPR036093 GO:0003677|GO:0006355
Dod09g1834 204 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 3 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1834 Dod-Chr9 39909059 39910732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1834 6 167 NAC Transcription Factor Family AT1G61110 42.690 1.22e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g1834 NAM 1.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1834 - - gmx:100170711 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1834 09 39909059 39910732 Dod09g1834 09 39909059 39910732 ECH