Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1824 ATGAATCTCCCTTCTTCTCTCTCCCGCTATGTTGCTCCTCTCTTTTCCGTGGTTCCCAACTCCAACCCCAGGAGCAGTAGTAGTGTGGATAATATCGCCATTGAAGGTCGTAACTTAAATTTCTCTTTCACTTCGAGGCAAGCAAAGGCTGTACCTGTTCTTCGGGATTGCTCACTTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGTTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGCCTTTTGAATCCAACTTCAGGCACTGTGTATGTGAATGAGCCTAAAAGTTTTGTTTTTCAGAATCCAGATCATCAGGTGGTGATGCCTACAGTAGACGCTGATGTTGCATTTGGTCTTGGTAAGTTCAGTTTGACCGATGATGAAGTAAGATCTAGGGTGTCAAGAGCTTTGCATGCTGTAGGCCTGTCGGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTCGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTTTTGTTGGATGAGCTCACAACATTCTTGGATGAAACTGACCAGGTTGGGGTTATTAAAGCTGTTAGGAACTCTTTGGATACCTCTGCGGAAGTTACAGCGTTATGGGTCACCCATCGTTTGGAAGAACTAGAGTATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTTGTCAAGCATGGAGATGCGGCTAGCATAAGGAGTTTCATTGAAGCCAGACAATCCGCCTATATTAAACAGATCAGTTCCCAATAG 795 0.4553 MNLPSSLSRYVAPLFSVVPNSNPRSSSSVDNIAIEGRNLNFSFTSRQAKAVPVLRDCSLRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVYVNEPKSFVFQNPDHQVVMPTVDADVAFGLGKFSLTDDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSLDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVKHGDAASIRSFIEARQSAYIKQISSQ* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1824 264 SMART AAA_5 63 236 IPR003593 -
Dod09g1824 264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 259 IPR003439 GO:0005524
Dod09g1824 264 CDD ABC_cobalt_CbiO_domain1 35 236 IPR015856 GO:0005524|GO:0016020|GO:0055085
Dod09g1824 264 ProSitePatterns ABC transporters family signature. 159 173 IPR017871 GO:0005524
Dod09g1824 264 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 25 260 - -
Dod09g1824 264 Gene3D - 29 264 IPR027417 -
Dod09g1824 264 Pfam ABC transporter 54 186 IPR003439 GO:0005524
Dod09g1824 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 251 IPR027417 -
Dod09g1824 264 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 25 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1824 Dod-Chr9 39844374 39848633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1824 22 264 Calmodulin-binding Proteins AT2G36910 28.947 1.22e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1824 - - gmx:100813654 426.402